Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3684 ATGGCAGAGGAATCTAAGCTGAAATGGGAAGGCAAAGCCATTGTTGAGCTTCCAGGGACAGGCGAAGATGCAGTGTGGCCCTTTTTAGAGGATTTCTGCAACCTGCACAAGTTTTTCCCCATTGATACTAGTTACCAAGTTGAGGGGATTCAAGGCCAACCTGGTCTCATCCGCTACTGTGCTTCCACCATAAAAGGGGATGATGCTGCTGATGAGACAACCATCAAGTGGGCTAAAGAGAAGCTGCTGACAATTGATCCCGTCCAACGTTGTTTGTCCTATGAAATTGTCGACAACAACATCGGATTTAAGTCTTATATGGCAACACTGAAAGTAGTCCCGGTCAATAGGGATGATGCTAAACTAGCAGGGTGCAAGATCGAATGGGGGTTTGTTAGTGATCCAATGGAAGGGTGGAGCTTTCAAGATTTGATGTCTTACATTGAGTCATCTCTCCAGTTCATGGCCAACAAAATTGATCAGCTTGCATGCTCTGAGAATTAA 504 0.4524 MAEESKLKWEGKAIVELPGTGEDAVWPFLEDFCNLHKFFPIDTSYQVEGIQGQPGLIRYCASTIKGDDAADETTIKWAKEKLLTIDPVQRCLSYEIVDNNIGFKSYMATLKVVPVNRDDAKLAGCKIEWGFVSDPMEGWSFQDLMSYIESSLQFMANKIDQLACSEN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3684 167 SUPERFAMILY Bet v1-like 23 163 - -
Lja1g3684 167 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 5 163 - -
Lja1g3684 167 Pfam Polyketide cyclase / dehydrase and lipid transport 23 155 IPR019587 -
Lja1g3684 167 CDD PYR_PYL_RCAR_like 9 160 - -
Lja1g3684 167 Gene3D - 2 166 IPR023393 -
Lja1g3684 167 PANTHER - 5 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3684 Lja-Chr1 46047111 46047614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3684 - - gmx:100798368 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3684 1 46047111 46047614 Lja1g3684 1 46047111 46047614 ECH
Lja1g3684 1 46047111 46047614 Lja5g3037 5 59424079 59430098 ECH