Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02062 ATGAAGGAGGACGCCGAGAATGATAAAGAGAAAGACAGGAAAATTTGGGGAGCTTTACTCTTCGGCTTAATTGGTGCCACCGTCACTACCTTTGCGGTCGGTCAGCTGCGGAGGAGTGTCGATTGGTTCTATGTCCAGCTATCGAGGACACAGTCACGTAAAGGACAGAGAGGTGGTTCGTTCCGAACATCTTTTCAGGAAGAGGCGTGGAGGAGGCACAATAAGAGACTGCAAGAGGAGTACGAGGAGGAGATGGAAAGAGTGGAACGAATAAGGCGTATGCAAAGCGTGTTTAATAGAGAAAGGAATAAGTACAAAAGAAGCTATGAGAGCTGGAGGGAGAACGGTCATGGTGCATATCATCAGCATTTCCAGAGAGAAGATTGGTACTGGAAGACTGATACATCTTTTAGAGAACGGAGGACTAATTATCGAGAAACTCCTAGAGAGACTGGAAATTATGCATTATCACATCACTACTCAATTTTGGGTCTTGACAGGTTTAGAAAAACGCCATATTCAGATGCTGAGATTAAGACAGCATTTAGGACCAAGGCAAAGGAGTATCATCCTGATCAAAACCAGGATAATATTGAGGCTGCTGAGGCGAAGTTCAAGGAAGTGTTGACTTCCTACGAGGCCATAAAACAGGAAAGAAGGGACTAA 666 0.4474 MKEDAENDKEKDRKIWGALLFGLIGATVTTFAVGQLRRSVDWFYVQLSRTQSRKGQRGGSFRTSFQEEAWRRHNKRLQEEYEEEMERVERIRRMQSVFNRERNKYKRSYESWRENGHGAYHQHFQREDWYWKTDTSFRERRTNYRETPRETGNYALSHHYSILGLDRFRKTPYSDAEIKTAFRTKAKEYHPDQNQDNIEAAEAKFKEVLTSYEAIKQERRD* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02062 221 CDD DnaJ 159 213 IPR001623 -
Lapu9g02062 221 PRINTS DnaJ domain signature 182 197 IPR001623 -
Lapu9g02062 221 PRINTS DnaJ domain signature 200 220 IPR001623 -
Lapu9g02062 221 ProSiteProfiles dnaJ domain profile. 158 220 IPR001623 -
Lapu9g02062 221 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 220 - -
Lapu9g02062 221 Coils Coil 198 218 - -
Lapu9g02062 221 SUPERFAMILY Chaperone J-domain 157 218 IPR036869 -
Lapu9g02062 221 Gene3D DnaJ domain 152 221 IPR036869 -
Lapu9g02062 221 Pfam DnaJ domain 159 219 IPR001623 -
Lapu9g02062 221 Coils Coil 67 94 - -
Lapu9g02062 221 SMART dnaj_3 157 220 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02062 Lapu-Chr9 35401715 35410005 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02062 - - gmx:100812371 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02062 9 35401715 35410005 Lapu9g02062 9 35401715 35410005 ECH
Lapu8g00798 8 26087404 26091503 Lapu9g02062 9 35401715 35410005 PCT