Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00837 ATGGACCCTTCTATCATGAAGCTTCTAGAAGATGATGAGGATGAAACAATGCATTCAGGGGTGGATGTGGAAGCCTTCCAGGCTGCTCTAAATAGAGATATAGGAGGAGATGTGTCTACTTCTCAGTTTTCTGGTTCAGATGCAGTGTTGTCTCAAGGAAGCAATAGTACATCAAGTCAATCTTTACCACAGTGGCCTACTTCTAACCATGACAGCCAAACTGATGGTCAAAATCAAGAGCCTAAAACTGCACAACAAGAGCAACATTCATCTGAGATGGAGCTGAAGCAACATAGCTCTCTTGGCGAAAACCTTCAGCATGTTGCTTCTCAGGATGTAAATAATCCTCATTTATCACAGAAACAATCGCAAGATGACAGTCACCAAGCACCAGCTGTACAAGTTCCCCTCCACAATTCTCAAACTATCAGAATTCAGAATTCTGGAAAGGATTCAGTCCTTAATAATGAAGTAGTAAAGAGTCATAATCCCAGCAGTGAATCTCAGTATGCGAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCAAGTGGCCAAGGAAATCGTAGTAAGCAAGTACCATTTGGCCTGTTGTTACCCATCTTGCTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACCTTATTTGCTAAATTGAAGAAAGATGAAATACCAAAGGACAGTTTCGTGCGGCTTATGAAAGGTATCGTAGGGGACCAAATGCTTAGATTAGCAATAGGAAAGCTGCAAATGCAACCACAGGCAAGGCCCAATCAAGCATCTGCTGGGCAGCAGCATCCTGTAAGGATGCAAGCTGTTAGTTCAGGTGCAAGGAAATTGAATGATCCCCATGCTTTAGCACAGATGCACCAAAGAAGTATGAATGTTGTCGTTGACCAATCTCGCATGAGTTCTTCAGCTGGCCAAACTATGGATAGCAATGCTAGAAAATCTCAGGAATTTGATGTTAAAATAGAATCTCAAGGATTGCAACCAAACCAGTTGACGTCTTCCAGTTCCAACATAGTTGGTCAAGAAACAGAAAGAACATCAGTTCACTTACAAGGGCTCAATAAGCAGCAGCAACACCATCTACATTTTTCATCAGCATATGGAAACAGTGGTGGTAACTATAACCCCTTTTCTGGGACAACAAGTAGTTCCACTTCATCTATCAAACCGCAATCGCATGACTCACACATGAGTCAAATTCCTCATCAAAGTATTGGTTCAAATCACTTGGGTGGGTCAACACATGGTTTAAGTGTAATTGGTATGACAAAACACGAACAGCAGAATACTTTCAATGATACCAAGAGACTGCCAGGTGGATCTGTGTCTTCCACTGTAAACAATATAGCATCTCAACAAACTTCAAATGCTTGGCAACCGTCAAACAAAGAGCAAAATCTGGGCTTAATGTCATCTGTTTCTTATGTCAAGAAGGAACCTAGTGACTTGTCTACTGAGCAGCAAAATAGGCATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTGCTCAGCTTGAACAGAGTGGTGGCGGTCAAGGAACTCTAAAAGATGAGTTTTCTAGAGGTCTTCCAGCATCCACAAGCATGCCACCTACAACATCTACTGGCTTGCTACCGCACAGTTCTGCTTCCTCTTCTGGAATGACCCACCTAGACTCCAGTGTCTCGCTAAGCTCTCAGATTCCGTCAAATGCTTCTGGAGTTGTTGCAAGGGCATCCCTTAAAAAGTCTGCTGTTGCCCAAAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTTCTAGTAAAAAACAAAAAACTTCTGGGGGATATGTTGAACAAAGCATTGAACAACTTAATGACGTCACTGCTGTTAGTGGAGTTGATCTTAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCCAAAGAGGATAGTCGAGCATCAGAAGCATCTCGAAAGGCTGTCCAAGAAGAAGAGGAAAGGCTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGACATCAGTCAGTGTCCAACTTGTGTCATACCTCTGCCCATATTGTCCAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGCTTGTCACTGAGTGTGGAGGAAAGGATGCGTGGACTGATAAGTAACCTGATTAGAATATCAAAACAGAGGGTTGATTTTGAGAAAACGAGACATCGAACTGTTGTCACTTCAGATGTTCGGCAGCAAATCATGACAATAAATAGGAAAGTAAGGGAAGAGTGGGAGAAAAAACAGGCAGAAGCTGAGAAGCTTCGTAAACTAAATGATGTTGATGGCAATGCTGGAGTTGATGGTGACAAGGATAAGGACGATGGCCGTGCTAAATCAACAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGATATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAAGCAGAAACGTGAAGGGGGAGTGGACGTGGCATCTGGTTCTCAACCAACTAAAGATGTGAATCGCAAATCTGCATCAACTTCTGAAAGAAGTACAAAGGATAACCAAGAAGGGGAGAAAAGAGGTTCAACCCCCTTTCTATCAAGTTCAGTGGCTAGAAAACTTGGGAAGAGTCATGCCATGGCCCCTCAAACTAGGGTAGCTCGAAGCATCTCTGTCAAGGATGTGATTGCAGTCCTGGAGAGGGAGCCCCAGATGTCTAAATCCCCACTCATACATCGCTTGTACGAGAAAATTCATTCTGAAGCCCCAGTTGAACAAGGTTAA 2844 0.4325 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDVSTSQFSGSDAVLSQGSNSTSSQSLPQWPTSNHDSQTDGQNQEPKTAQQEQHSSEMELKQHSSLGENLQHVASQDVNNPHLSQKQSQDDSHQAPAVQVPLHNSQTIRIQNSGKDSVLNNEVVKSHNPSSESQYAKLQQMSNQQATVSEQPSGQGNRSKQVPFGLLLPILLPQLAKDRAMQLQTLFAKLKKDEIPKDSFVRLMKGIVGDQMLRLAIGKLQMQPQARPNQASAGQQHPVRMQAVSSGARKLNDPHALAQMHQRSMNVVVDQSRMSSSAGQTMDSNARKSQEFDVKIESQGLQPNQLTSSSSNIVGQETERTSVHLQGLNKQQQHHLHFSSAYGNSGGNYNPFSGTTSSSTSSIKPQSHDSHMSQIPHQSIGSNHLGGSTHGLSVIGMTKHEQQNTFNDTKRLPGGSVSSTVNNIASQQTSNAWQPSNKEQNLGLMSSVSYVKKEPSDLSTEQQNRHNLSKLHGYSSVNSAQLEQSGGGQGTLKDEFSRGLPASTSMPPTTSTGLLPHSSASSSGMTHLDSSVSLSSQIPSNASGVVARASLKKSAVAQKKPLEALGSSPPPSSKKQKTSGGYVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRASEASRKAVQEEEERLILQKAPLQKKLIDISQCPTCVIPLPILSKCGLKGMSNDVEKCLSLSVEERMRGLISNLIRISKQRVDFEKTRHRTVVTSDVRQQIMTINRKVREEWEKKQAEAEKLRKLNDVDGNAGVDGDKDKDDGRAKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGVDVASGSQPTKDVNRKSASTSERSTKDNQEGEKRGSTPFLSSSVARKLGKSHAMAPQTRVARSISVKDVIAVLEREPQMSKSPLIHRLYEKIHSEAPVEQG* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00837 947 ProSiteProfiles RST domain profile. 190 261 IPR022003 -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 595 618 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 160 195 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 1 20 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 604 618 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 366 411 - -
Lapu8g00837 947 Coils Coil 757 777 - -
Lapu8g00837 947 CDD TAF4 620 933 IPR007900 GO:0005669|GO:0006352
Lapu8g00837 947 MobiDBLite consensus disorder prediction 639 660 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 35 101 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 862 879 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 537 572 - -
Lapu8g00837 947 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 6 939 IPR045144 GO:0005669|GO:0006352
Lapu8g00837 947 MobiDBLite consensus disorder prediction 837 907 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 35 86 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 304 354 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 304 322 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 330 354 - -
Lapu8g00837 947 Pfam RCD1-SRO-TAF4 (RST) plant domain 193 256 IPR022003 -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 515 572 - -
Lapu8g00837 947 MobiDBLite consensus disorder prediction 775 813 - -
Lapu8g00837 947 Pfam Transcription initiation factor TFIID component TAF4 family 625 933 IPR007900 GO:0005669|GO:0006352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00837 8 26527001 26536459 Lapu8g00837 8 26527001 26536459 ECH