Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00805 ATGGATCTTGGAGTGGTGGGTTTGGAGGGGTTGGTGGGTTCAGAAAGTAGTTGCGCCTTTGGTTCTTCTCTTGCTTCAGATCCTGAGACAAAGCACAAGTGGTACGGATCTGGGGTGCTCAAGCAAGAGAGATCTGGCACAGCAAGTGAAGATGAGTGGAGAACTTCAAAAGTGCCTAAAACTGATGACAACATGTCTGCTGCATCCAAAGCAATGCTCTTTCACCAGAGAAACTCTCTGCTGAGATCTAATGCCACGCTTTTCACCGAGGGCCACAACCAACCACAAATGTTGAGCTTCTCTTCACCAAAATCAGAGCCTTTGTTGGTGGACAAGGCCTCCTTAAATGCCACATTGCCTTTTTCATACCACCAATTGTCTAGTTACAGCAGAAATACAGGTTACAGTTCGGGAAGCATAAGCATGCATGGGGCTTTGACTGGTGTGAGAGGGCCATTCACGCCTTCACAGTGGATGGAACTTGAACACCAAGCTTTGATCTACAAGTACATCACAGCAAACGTGCCTGTACCAACTCATCTTCTCATACCCATCAGAAAAGCACTCGATTCTGCTGCCTTCTGCAACTTTTCAACCGGACTCCTCAGGCCCAACACATTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACAGACCCCGAGCCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCGAGAGATGCCGTAGTTGATCAGAAGTATTGCGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACTACCACCACCACAACCACCACTACTCCTCCTAATGCTTCCTCAAACTCCATTGTGGTGCCCGGCAACAACAACAACACCACCTTTGCACACAATAATGTGCACCACCCTCTTCCATCTCATTCCTCTCCTGCCAGCACCATCAATAGGATGTTTATGAGTAACAAAGAGAACAATAACAACGCTAGTGAGAAGATGCAGGATGGCCCTGCACTTCCCATGGTGCCTCCAACTCTTGAGCTGAAACCAAAGGACCCTTTCATGATTCATAAACACCAACTCCCATATGATGAATCGTCCTCAAGGAACAACAATGAGTTTGGGCTTGTCACTTCTGATTCCTTGCTCAACCCTTCACAGAAGAGAAGCTTTGGTTCATCCTCTTCACAGAAGGATGATTCTGAGTCCCAACAACAACATTCCCTCAGGCACTTCATTGACGACTCTCCCAAACCACAGTCTCATCATCACCATCATCGTGTTTGGCCTGAACTTGACAACATGCAGTCAGATAGGACTCAGTTATCAATCTCCATACCGATATCTTCCTCAGACTTCATGTCATTCACTACCTCCTCACCCTCTAATGAGAAACTCACATTGTCACCCCTAAGGCTTTCAAGGGAGTTAGACCCCATTCAAATGGGGTTGGGAGTGGGAAGTGGTGTTCCCAATGAGTCAAACACTAGGCAAGCCAACTGGATTCCAATCACTTGGGAGAGTTCTATGGGTGGTCCTCTTGGTGAGGTTTTGAACCTGAGTAGTAGTAATAACAACAGCAATGGAAGTGATCACTGTGGCAAGAACACTTCTGCTCTCAACCTCATGAAAGATGGGTGGGACAATAGTCCTCCACTAGGGTCATCCCCTAATGGGGTGTTGCAAAAAACAGCATTTGGATCACTTTCCAATAGCAGTGCTGGAAGCAGTCCACGGGCAGAGAACAACAACAACAAAGAAGGTGCCAGTGCCACCACACTGTGCAATGCCTTGTGA 1815 0.4804 MDLGVVGLEGLVGSESSCAFGSSLASDPETKHKWYGSGVLKQERSGTASEDEWRTSKVPKTDDNMSAASKAMLFHQRNSLLRSNATLFTEGHNQPQMLSFSSPKSEPLLVDKASLNATLPFSYHQLSSYSRNTGYSSGSISMHGALTGVRGPFTPSQWMELEHQALIYKYITANVPVPTHLLIPIRKALDSAAFCNFSTGLLRPNTLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTTTTTTTTTPPNASSNSIVVPGNNNNTTFAHNNVHHPLPSHSSPASTINRMFMSNKENNNNASEKMQDGPALPMVPPTLELKPKDPFMIHKHQLPYDESSSRNNNEFGLVTSDSLLNPSQKRSFGSSSSQKDDSESQQQHSLRHFIDDSPKPQSHHHHHRVWPELDNMQSDRTQLSISIPISSSDFMSFTTSSPSNEKLTLSPLRLSRELDPIQMGLGVGSGVPNESNTRQANWIPITWESSMGGPLGEVLNLSSSNNNSNGSDHCGKNTSALNLMKDGWDNSPPLGSSPNGVLQKTAFGSLSNSSAGSSPRAENNNNKEGASATTLCNAL* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00805 604 SMART QLQ_2 151 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu8g00805 604 MobiDBLite consensus disorder prediction 250 355 - -
Lapu8g00805 604 MobiDBLite consensus disorder prediction 266 339 - -
Lapu8g00805 604 MobiDBLite consensus disorder prediction 45 59 - -
Lapu8g00805 604 PANTHER GROWTH-REGULATING FACTOR 5 92 465 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lapu8g00805 604 Pfam QLQ 152 186 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu8g00805 604 Pfam WRC 222 264 IPR014977 -
Lapu8g00805 604 MobiDBLite consensus disorder prediction 557 604 - -
Lapu8g00805 604 MobiDBLite consensus disorder prediction 523 604 - -
Lapu8g00805 604 MobiDBLite consensus disorder prediction 43 62 - -
Lapu8g00805 604 ProSiteProfiles QLQ domain profile. 152 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu8g00805 604 MobiDBLite consensus disorder prediction 371 408 - -
Lapu8g00805 604 MobiDBLite consensus disorder prediction 367 414 - -
Lapu8g00805 604 MobiDBLite consensus disorder prediction 523 543 - -
Lapu8g00805 604 ProSiteProfiles WRC domain profile. 221 265 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00805 Lapu-Chr8 26203099 26207938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00805 1 594 GRF Transcription Factor Family AT2G22840 41.789 8.95e-110 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lapu8g00805 WRC 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00805 - - gmx:100818860 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00805 8 26203099 26207938 Lapu8g00805 8 26203099 26207938 ECH