Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00803 ATGAAGTCCATGAATGATGGCAACACCGATGATGGCAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGAAATTACTTCTCCCGCTGACCCTCCCCATCATCATCATCATCACTACTATCATCACCCTCAGGCTTCTGCTGCAGCACCTTGCAACACTGTTCCCACAAACTTCTATATTTCCCCCTCTCACCTTAACACCTCAGGAATCTGCTATGACGTTGGAGAAAACAGTGCCTTTCACTCTCCCTTGGCCATGATGCCCCTCAAGTCAGATGGGTCACTTTGCATTATGGAAGCTCTCACCAGATCACAAACCCAAGGTAGGCCTTCTTACCCAGGGTTTTGTGGTCTTGTTGAAGTGATGGTGCCAACTACATCTCCAAAACTTGAAGACTTCCTAGGTGGTGCAAGTATGGGAGCTCAAGACTATGGAGGTCATGAAAGAGAAGCAATGGCTCTAAGCCTAGACAGCGTCTACTATGGTGGTCAGAATGCGGAACCTGAAGCCAACAGAAACCATCCTTCTTCTTTAGACCTTCTTTCTGACCCCTTCAGGCAACAAACTCATCCATATTACTCGGGGCTTGGGATTTACCAAGTGGAGGAGGAAGCCAAGCAACCCCATGCGACAGTTTGCAGCTCCCAAATGCCTCAAGTGGTGGAAGGAGGCATTGCTTGCTTCAAAAACTGGGTGCCCCCTAGGGGATATTCTTCAACTCAGCAGAATCTGCAGCAGCATCAAGTGAATAGTAGTAGTAGTGGCATGGGGGAGGGTCATGGAACTTCTGGGAATGTTGGTGTTGGAAGCGTTGGTTGTGGGGAGTTACAGTCTCTGACTTTGTCTATGAGTCCTGGTTCTCAATCTAGCTGTGTCACACTTCCAACTCAGATCTCATCTTCTAGAACTCAATCAGTGGTTGTGGATGCCAAAAAGAGAGGGTCTGCTAAGCTTGGCCAGAAGCAACCTGTGCATAGGAAATCCATTGACACATTCGGCCAGAGAACTTCTCAGTATAGAGGTGTGACAAGGCATCGATGGACTGGAAGATATGAAGCACATTTGTGGGATAATAGTTGCAAAAAGGAAGGGCAAACCAGGAAAGGACGACAAGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCATATGATCTTGCTGCTCTCAAGTATTGGGGACCTTCAACGCACATAAACTTCCCAATAGAAAATTACCAAACTGAACTTGAAGAAATGAAGAATATGAGCAGGCAGGAATATGTGGCGCACTTGAGAAGAAAGAGTAGTGGGTTTTCGAGGGGAGCCTCGATGTACAGAGGAGTGACAAGGCACCATCAACATGGCAGGTGGCAAGCAAGAATAGGCAGAGTTGCAGGAAATAAGGACCTTTACCTTGGGACATTCAGTACTCAAGAGGAAGCAGCTGAAGCATATGACGTAGCTGCAATCAAATTTCGAGGGGTGAATGCTGTCACTAACTTTGACATCTCAAGATACGATGTTGAGAGGATCATGGCCAGCAACACCCTTCTTGCTGGAGAGTTGGCAAGAAGAAACAAGGAAAGTGAGCCAAGAACTGAGGCCATAGAGTACAACGTTGTGTCAAGCCAACAAGTCATTGGCAGCAGGGAAGAGGCTGAGACTGTGAACAACAATGACAATAATGAGAATGGCTCATCAGATTGGAAGAAGGTTTTGTATCATCAGCAACAGTCAACCAACAACTGTGACATGAAAACCATGAAGTGTGGAAATTATAGAGGTTCTGCTTTCTCTGTGTCCCTACAAGATCTCATTGGGATTGACTCAGTAGGATCTAGCCAGGCCATGCTAGAGGAGTCTACTAAGATAGGTACTCATTTTTCAAACCCCTCCTCGCTGGTCACCAGTTTAAGCAGCTCAAGGGAAGGTAGCCCTGACAAAACGGGTCCCACTGTGCTCTTTCCAAAGCCTCCAGTGGGGTCAAAGATTGTCACTAGCCCTATTGCTAATGGTGCGAGTGTGAGCTCTTGGTTCCCTTCTCAAATGAGGCCAGTCTCAATGTCTCACTTGCCAGTTTTTGCTGCTTGGAGTGATACCTAG 2097 0.4688 MKSMNDGNTDDGNNHNWLGFSLSPHMKMEITSPADPPHHHHHHYYHHPQASAAAPCNTVPTNFYISPSHLNTSGICYDVGENSAFHSPLAMMPLKSDGSLCIMEALTRSQTQGRPSYPGFCGLVEVMVPTTSPKLEDFLGGASMGAQDYGGHEREAMALSLDSVYYGGQNAEPEANRNHPSSLDLLSDPFRQQTHPYYSGLGIYQVEEEAKQPHATVCSSQMPQVVEGGIACFKNWVPPRGYSSTQQNLQQHQVNSSSSGMGEGHGTSGNVGVGSVGCGELQSLTLSMSPGSQSSCVTLPTQISSSRTQSVVVDAKKRGSAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPIENYQTELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKESEPRTEAIEYNVVSSQQVIGSREEAETVNNNDNNENGSSDWKKVLYHQQQSTNNCDMKTMKCGNYRGSAFSVSLQDLIGIDSVGSSQAMLEESTKIGTHFSNPSSLVTSLSSSREGSPDKTGPTVLFPKPPVGSKIVTSPIANGASVSSWFPSQMRPVSMSHLPVFAAWSDT* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00803 698 SUPERFAMILY DNA-binding domain 342 408 IPR016177 GO:0003677
Lapu8g00803 698 Gene3D AP2/ERF domain 342 408 IPR036955 GO:0003700|GO:0006355
Lapu8g00803 698 Gene3D AP2/ERF domain 442 502 IPR036955 GO:0003700|GO:0006355
Lapu8g00803 698 MobiDBLite consensus disorder prediction 627 645 - -
Lapu8g00803 698 MobiDBLite consensus disorder prediction 243 265 - -
Lapu8g00803 698 Pfam AP2 domain 443 492 IPR001471 GO:0003700|GO:0006355
Lapu8g00803 698 Pfam AP2 domain 343 398 IPR001471 GO:0003700|GO:0006355
Lapu8g00803 698 MobiDBLite consensus disorder prediction 627 655 - -
Lapu8g00803 698 SUPERFAMILY DNA-binding domain 441 502 IPR016177 GO:0003677
Lapu8g00803 698 CDD AP2 441 502 IPR001471 GO:0003700|GO:0006355
Lapu8g00803 698 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 131 573 - -
Lapu8g00803 698 ProSiteProfiles AP2/ERF domain profile. 442 500 IPR001471 GO:0003700|GO:0006355
Lapu8g00803 698 CDD AP2 342 407 IPR001471 GO:0003700|GO:0006355
Lapu8g00803 698 ProSiteProfiles AP2/ERF domain profile. 343 406 IPR001471 GO:0003700|GO:0006355
Lapu8g00803 698 PRINTS Ethylene responsive element binding protein signature 482 502 IPR001471 GO:0003700|GO:0006355
Lapu8g00803 698 PRINTS Ethylene responsive element binding protein signature 344 355 IPR001471 GO:0003700|GO:0006355
Lapu8g00803 698 MobiDBLite consensus disorder prediction 243 274 - -
Lapu8g00803 698 FunFam AP2-like ethylene-responsive transcription factor 441 502 - -
Lapu8g00803 698 FunFam AP2-like ethylene-responsive transcription factor ANT 342 408 - -
Lapu8g00803 698 SMART rav1_2 442 506 IPR001471 GO:0003700|GO:0006355
Lapu8g00803 698 SMART rav1_2 343 412 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00803 Lapu-Chr8 26144961 26149176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00803 423 698 AP2-EREBP Transcription Factor Family AT4G37750 26.984 3.85e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Lapu8g00803 AP2 4.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00803 K09285 - gmx:100798179 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00803 8 26144961 26149176 Lapu8g00803 8 26144961 26149176 ECH
Lapu8g00803 8 26144961 26149176 Lapu9g02065 9 35437758 35441975 PCT