Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00791 ATGAAGAGGTTCTCTGCCTGCTTCTTCACAAGCAGAATCTCTAAGTTTCACTCTCGCTGGAAGCATAACAAATCTCAATCTCAGATCATGGCAGGAAACATCTCTGATCCAAGAGGGAGCAAGGGTGCAAATATTTTACTTAATCATGACTTTTCTAGCGGGCTGAACTCTTGGCATCTCAATTCCTGCACTGGCTATGTAATTTCAGCTGAACCAGGTGCTCAAGGAGACATTTCAATGGAGTTGGGTGTTAATTATGCCGTTATCACTGACCGAAAGGAATGCTGGCAAGGCCTTGAGCAAGACATCACAGACAGAATTTCCACTGGTTACACTTACACAGTTTTGGCTTGTGTGGGAGTATCCAGTCTTTCTCAGGGATCTAGTGATGTTCTTGCTACTCTGAAACTAGAATATCATGATTCAGCTACTAGTTACTTGTTCATTGGAAGAACTTCTGTTAATAAGGATAGCTGGCAAAAGTTGGAAGGGACATTCTCATTGTCAGCTATGCCTGATCGGGTTGTATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACCTGCTCATACGATCAGTAGAGATAAACTGTTCCACTTCAAATAATAATACCACAAGCAAAGGATGTGTTTCAGCGGGAGATGACAACATCATCATCAACCCACAATTTGATGACGGTCTGAATAACTGGTCTGGACGAGGCTGCAAGATTATGTTGCATGATTCCATGAATGATGGGAAAATTGTTCCAAAATCTGGGAAATCTTTTGCATCAGCAACAGAACGCACACAGAACTGGAATGGAATTCAGCAAGATATCACTGGTCACGTGCAGCGCAAGCTAGCCTATGAGGTCACTGCTGTAGTTAGAATATTTGGAAACAATGTCTCTACAGCTGATGTACGGGCTACTTTGTGGGTCCAAGCACCAGATCTTAAAGAACAGTATATAGGCATTGCAAATGTGCAGGCAACAGATAAAGATTGGGCTACTATGCAGGGAAAATTCCTTCTAAATGGTTCTCCATCAAAAGTGGTCCTTTATTTAGAGGGCCCCCCTCCAGGCACTGACATTCTTCTCAATAATATGGTCTTGAAGCATGCACCTAAAACACCTCCTTCAACCCCGCCAGATGTAAAGAATGTTACTTTTGGGGTTAATATAATTGAGAACAGCAATCTAGCTGATGGCACCAATGGATGGTTTTCCCTTGGCAATTGCACTTTAAGTGTTAAAACTGGTTCACCACATATAGTTCCACCAATGGCAAGAGATTCTCTTGGTGTTCATGAACTCCTAAGTGGGCGCTACATCCTTGTAACTAATCGAACACAAACATGGATGGGTCCTGCTCAGATTATCACTGATAAAGTGAAACTCTTTTTGACTTATCAAGTGTCTGCTTGGGTCCGGATTGGCTCAGGATCATCAGGGCCACAGAATGTGAATGTTGCCCTTGGTGTTGACAACCAGTGGGTCAATGGAGGACAAACTGAGGTTTCTGATGACATGTGGCATGAAATTGGAGGGTCCTTTAGAATTGAAAAGCAGCCATCAAAGGTTATGGTTTATGTCCAAGGTCCTGCTTCTGGTGTGGACTTAATGGTGGCTGGACTTCAAATTTTTCCTGTGGATAGACATACAAGATTTAGATATTTAAAGATCCAAACAGATAAGATTCGCAAACGTGATGTTGTCCTGAAATTCTCTGGGCTGGACTCTGGCAGCTACGCTAACACCTCGGTTCAAATTAGACAAACACAGAATGATTTCCCAATTGGAACATGCATCAGTAGAACAAACATTGACAATGAGGACTTTGTTAACTTCATTGTGAAGCATTTTAACTGGGCAGTGTTTGGAAACGAGTTGAAGTGGTATTGGACCGAGCCACAACAAGGGAATTTCAATTACAAGGATGCTGATGATCTTTTAAGCCTGTGTCAGAAGCACAATATACAAACTCGTGGTCATTGTATCTTCTGGGAAGTGGATGGAGTAGTTCAGCAGTGGATCAAATCACTGAACAAAAACGATTTGATGACGGCTGTCCAGAACCGCCTGAACGGCCTTCTGAATCGTTACAAGGGCAAGTTTAATCACTATGATGTCAACAATGAAATGCTGCATGGTTCATTCTTTCAAGATAGGTTAGGCAAGGACATAAGGGCTAACATGTTCAAAACTGCAAACCAACTAGACCCTTCTGCTACACTCTTTGTAAATGATTATCATGTTGAGGATGGATGTGACACCAAATCATGTCCAGATAAGTACATCCATCATATTCTTGATTTGCAAGAGCAAGGTGCCCCAGTTGGGGGAATTGGAATTCAAGGCCACATAGATAGTCCAATAGGGCCAATAGTGAGTTCTTCCCTTGACAAGTTGGGTATTCTTGGTCTACCTGTATGGTTTACCGAGCTTGATGTGTCTTCCATCAATGAATATGTCAGAGCAGATGATCTTGAAGTTATGCTACGTGAAACCATGGCACATCCTGCAGTTGAAGGCATCATGCTGTGGGGTTTTTGGGAGCTGTTTATGAGTAGGGACAATGCACACTTGGTGAATGCAGAAGGTGACATCAACGAGGCAGGGAAAAGGTTCCTAGCTCTAAAACAAGAGTGGCTGTCTCACAGCCGTGGCCATATTGATGAACAAGGCCAATACAACTTCAGAGGCTTTCATGGAACATACAATGTGCAAGTTGTGACCCCATCAAAGAAAATTTCTAAGACATTTGTGATTGACAAAGGTGACACGCCACTGGTGGTATCCATTGATTTATAA 2793 0.4261 MKRFSACFFTSRISKFHSRWKHNKSQSQIMAGNISDPRGSKGANILLNHDFSSGLNSWHLNSCTGYVISAEPGAQGDISMELGVNYAVITDRKECWQGLEQDITDRISTGYTYTVLACVGVSSLSQGSSDVLATLKLEYHDSATSYLFIGRTSVNKDSWQKLEGTFSLSAMPDRVVFYLEGPAPGVDLLIRSVEINCSTSNNNTTSKGCVSAGDDNIIINPQFDDGLNNWSGRGCKIMLHDSMNDGKIVPKSGKSFASATERTQNWNGIQQDITGHVQRKLAYEVTAVVRIFGNNVSTADVRATLWVQAPDLKEQYIGIANVQATDKDWATMQGKFLLNGSPSKVVLYLEGPPPGTDILLNNMVLKHAPKTPPSTPPDVKNVTFGVNIIENSNLADGTNGWFSLGNCTLSVKTGSPHIVPPMARDSLGVHELLSGRYILVTNRTQTWMGPAQIITDKVKLFLTYQVSAWVRIGSGSSGPQNVNVALGVDNQWVNGGQTEVSDDMWHEIGGSFRIEKQPSKVMVYVQGPASGVDLMVAGLQIFPVDRHTRFRYLKIQTDKIRKRDVVLKFSGLDSGSYANTSVQIRQTQNDFPIGTCISRTNIDNEDFVNFIVKHFNWAVFGNELKWYWTEPQQGNFNYKDADDLLSLCQKHNIQTRGHCIFWEVDGVVQQWIKSLNKNDLMTAVQNRLNGLLNRYKGKFNHYDVNNEMLHGSFFQDRLGKDIRANMFKTANQLDPSATLFVNDYHVEDGCDTKSCPDKYIHHILDLQEQGAPVGGIGIQGHIDSPIGPIVSSSLDKLGILGLPVWFTELDVSSINEYVRADDLEVMLRETMAHPAVEGIMLWGFWELFMSRDNAHLVNAEGDINEAGKRFLALKQEWLSHSRGHIDEQGQYNFRGFHGTYNVQVVTPSKKISKTFVIDKGDTPLVVSIDL* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00791 930 Pfam Carbohydrate binding domain 43 184 IPR003305 GO:0016798
Lapu8g00791 930 Pfam Carbohydrate binding domain 215 352 IPR003305 GO:0016798
Lapu8g00791 930 Pfam Carbohydrate binding domain 387 530 IPR003305 GO:0016798
Lapu8g00791 930 Gene3D - 210 367 - -
Lapu8g00791 930 Gene3D - 385 542 - -
Lapu8g00791 930 Gene3D - 38 197 - -
Lapu8g00791 930 SUPERFAMILY Galactose-binding domain-like 214 369 IPR008979 -
Lapu8g00791 930 PANTHER GLYCOSYL HYDROLASE 373 922 IPR044846 GO:0004553|GO:0005975
Lapu8g00791 930 SUPERFAMILY Galactose-binding domain-like 385 546 IPR008979 -
Lapu8g00791 930 SUPERFAMILY (Trans)glycosidases 578 881 IPR017853 -
Lapu8g00791 930 Gene3D Glycosidases 577 885 - -
Lapu8g00791 930 SUPERFAMILY Galactose-binding domain-like 42 196 IPR008979 -
Lapu8g00791 930 Pfam Glycosyl hydrolase family 10 587 844 IPR001000 GO:0004553|GO:0005975
Lapu8g00791 930 FunFam Glycosyl hydrolase family 10 protein 211 367 - -
Lapu8g00791 930 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 578 873 IPR001000 GO:0004553|GO:0005975
Lapu8g00791 930 SMART glyco_10 624 874 IPR001000 GO:0004553|GO:0005975
Lapu8g00791 930 FunFam Endo-1,4-beta-xylanase A 579 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00791 Lapu-Chr8 25957471 25962833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00791 1 930 Glycoside Hydrolase AT1G58370 66.385 0.0 1323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00791 - - gmx:100816678 1743.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00791 8 25957471 25962833 Lapu8g00791 8 25957471 25962833 ECH
Lapu8g00791 8 25957471 25962833 Lapu9g02055 9 35290624 35293893 PCT