Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00790 ATGTTGAATCATGTGAGCAATAATAGTAATAGCTGCTCATGGCTGTTGTTCGTAGTGAGACACTACTCTAGAATTCAACCGCCAAGGCCTGTTTCTGTTGAACCAGTAATAAGAGTATCTAACAATATTGCCCGCCTGGATGCTCCTAAAGAGGGTCCAAAACCCAGACAGCTGTTATCATTGCCTCCTTTTCCTGGTCACCTCTTGCCTGCCAAGAGCTCAAGTAGTTGTCGTGGACATCGTGATTATGTTACTGCTGTCAATTGGATTAAGTATTACTTCAAGGGTGCATGGGGTTCTGTCATTGAATCCCATTTCAGGGAGGGTCTTGTGCAAATGGAGGGCTTAGTTGCTGCTGACTCTTTTACTCAGAAAGAAAAGCTGATGAAACCTATGCGAAAGATTAGACCTAATGAAGTGATGAAACATGGTGCCAGAGTTCATGTTCCTGTATCAATTGCTGAGACTAGGATTTCCAAAAGATATGATGCTATTCCTTGTGGAACACTATATCCAAATGCAGACGAAATTAAATATCTGCAAAGGCTTGTGATTTACAAGGACTCAGCTATCATTGTGCTTAATAAACCTCCGAAATTGCCGGTTAAGGGGAATTTACCAGTTCATAATAGCATGGATGCATTGGCAGCTGCTGCACTGTCCTATGATTATGACGAGGGCCCTAAACTAGTTCACCGTCTTGACAGAGAGAGTAGTGGCATCCTTTTACTGGGGAGAACTAAAGATAGTGCATCTCATCTCCAATGGTTGTTCACTAATATTAACAATGCCAAATCTTCTTGTAAGGCTTGGAATGATGCATGTGAAGCTACGTATCAGAGGTATTGGGCATTGGTCATAGGGACTCCCAAGGAGAAGGAAGGCAGAATTCATGCTCCTCTTTCGAAGGTGCTTCTTAATGATGGGAAGACTGAGAGGATAATCCTAGCTCACCATTCAAGTGTAGAACCACGTCAAGAGGCCGTAACTGAATATCGGGTGCTTGGTCCAAAGATAAATGGATGCTCGTGGGTTGAGCTACGTCCACTTACTTACAGGAAACACCAGTTGCGCGTCCATTGTGCTGAAGCACTTGGCACACCAATAGTGGGTGACTACAAGTATGGCTGGTTTGTGCACAGCCGATGGAAACAAATGCCACGAATCGATATCGAGCCAACAACCGGAAAACCATACAAGTTACGGAGGCCAGAAGGCCTAGATGTTCAGAAGGGAAGCGTTTTATCGAAGGTTCCTCTATTGCATCTTCACTGCAGAGAGCTTGTGCTCCCCAACATTGCCAAGTTTCTACATGTTTTGAACAATAGTTCAGAAGAACTACACAGTTCACTTAGCCAGCAGCCTGATGTTCTTCGATTTGTGGCAACAATGCCAACCCATATGAGAATTAGTTGGAATCTTATGTCATCGTATTTAGTCTGA 1443 0.4373 MLNHVSNNSNSCSWLLFVVRHYSRIQPPRPVSVEPVIRVSNNIARLDAPKEGPKPRQLLSLPPFPGHLLPAKSSSSCRGHRDYVTAVNWIKYYFKGAWGSVIESHFREGLVQMEGLVAADSFTQKEKLMKPMRKIRPNEVMKHGARVHVPVSIAETRISKRYDAIPCGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSASHLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGRIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVTEYRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRIDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLHVLNNSSEELHSSLSQQPDVLRFVATMPTHMRISWNLMSSYLV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00790 480 Gene3D Pseudouridine synthase 175 438 - -
Lapu8g00790 480 Pfam RNA pseudouridylate synthase 191 362 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Lapu8g00790 480 SUPERFAMILY Pseudouridine synthase 176 433 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Lapu8g00790 480 CDD PseudoU_synth_RluA_like 191 387 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Lapu8g00790 480 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 84 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00790 Lapu-Chr8 25946623 25954966 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00790 - - gmx:100817786 875.544