Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00788 ATGGATTTCATGAAGGTCTTCGATCAAACCGTCCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTGCTTAAGGTTCCAGAAATCGAACAGAAGGTGCTCGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTACTGCACTGGCAGAGATTGCACAGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGACTGGGCGAAACTGGAAAAGATTGGAGATATGTATACAAGGCCTTAGCGGTTATAGAGTATTTGGTAGCACATGGATCTGAACGTGCAGTTGACGACATTATAGAACATACTTTTCAGATCTCAGCGCTTTCTAGTTTTGAATATGTCGAACCAAGTGGGAAGGACGTAGGACTCAATGTAAGGAAGAAGTCTGAAAACATTGCGTCCCTTTTGAATGATAGAGATAAGATACATGAAGTCAGAAATAAAGCTGCTGCAAACCGTGAAAAGTATATTGGAGTTTCTTCTAGTGGTATGACATATAAGTCCGGTGGATCGGCCTCCTATAGTAGTGGCGGCAGCTATCAGAGCAGTGGTAAGTATGGAGGCTTTGGATCTAGAGATGGTGATAGGTTTGGTGATAACAATAGAGACAAGGGGGGATCCTATGAAGAAGATTACCATGGGAAATCACACCATGCCGTTGCAAGTGACAATCAAGACAACTCCTACAAGAAGGGTTCTGCACGCTCTGTCAGCAAAAGTCAGGAGAACAAGTCATCTAGAGTAGCAAAGTCATCAACTAATGCAAATAATTATGGTTCAGTTCCTTCTCAAAGTTCAAGTGTACCCACAAACAATACCGAGGATGATATGGATGATTTTGATCCAAGAGGAACTTCTACCAAAACTTCATCAGGAAACTCTAACCAAGTTGATCTCTTTGGACAAGATTTAATTGGTGACTTCATGGATGCTCCAACATCTGTTCCTGTAGAGAAGCCAGCAGCTGGTAATTTGACAGAGGTTGATCTTTTTGCAGATGCATCATTCATATCAGCAACACCTCAAATGGACAAAGGAACCAGTTCTCAACCACAGGCTGAGGTGGATCTATTTGCTTCACAACCTGCAATTCCTACAGTTACACCAACAGTTGACTTGTTTTCCATTCCTGAACCGGTAGTGCAGCCAGACAGCAAGCCAGAGAACTCTGGTCCTGTGAATAACAGCTCGTTTGATCCCTTTGCTGCTGTTCCTCTTAATAATTTCGATGGATCTGATGTTTTTGGTGATTTTACTTCTCAATCTGATCCTGTGTCTTCACAGCCCTCCGATAATGTTGTCAGTGATGGCAAACATGATAATGTCAGTGGTAAATCTTTAGCCGACTCTAAAGTTTTACCTAAAAAGGATACTTTCCAGGTGAAGTCTGGTGTCTGGGCTGATTCACTAAGCCGCGGACTGATTGATCTCAATATAACTGCCCCTAAAAGAGTGTCCCTTGCGGATGTTGGGATTGTGGGCGGCTTGAGCGATGGATCGGACGAAAAGGAGAAAGGTCCTCCGCCTTCATTTTTTATGGGGAGAGCTATGGGTTCAGGATCTGGTCTTGGACTTGGTAGATCTGGATTCACTCCTTCACAACCAGCACCTGGGGACGACATATTCTCAAACTTTGGCACCCAACAATATCAATTTGGTGGGTTCCAAAAGTAA 1692 0.432 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFTECQMVMNVLWTRLGETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKSENIASLLNDRDKIHEVRNKAAANREKYIGVSSSGMTYKSGGSASYSSGGSYQSSGKYGGFGSRDGDRFGDNNRDKGGSYEEDYHGKSHHAVASDNQDNSYKKGSARSVSKSQENKSSRVAKSSTNANNYGSVPSQSSSVPTNNTEDDMDDFDPRGTSTKTSSGNSNQVDLFGQDLIGDFMDAPTSVPVEKPAAGNLTEVDLFADASFISATPQMDKGTSSQPQAEVDLFASQPAIPTVTPTVDLFSIPEPVVQPDSKPENSGPVNNSSFDPFAAVPLNNFDGSDVFGDFTSQSDPVSSQPSDNVVSDGKHDNVSGKSLADSKVLPKKDTFQVKSGVWADSLSRGLIDLNITAPKRVSLADVGIVGGLSDGSDEKEKGPPPSFFMGRAMGSGSGLGLGRSGFTPSQPAPGDDIFSNFGTQQYQFGGFQK* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00788 563 FunFam Clathrin interactor 1 18 165 - -
Lapu8g00788 563 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Lapu8g00788 563 MobiDBLite consensus disorder prediction 290 304 - -
Lapu8g00788 563 MobiDBLite consensus disorder prediction 421 455 - -
Lapu8g00788 563 MobiDBLite consensus disorder prediction 421 445 - -
Lapu8g00788 563 Gene3D - 19 165 IPR008942 -
Lapu8g00788 563 MobiDBLite consensus disorder prediction 502 552 - -
Lapu8g00788 563 MobiDBLite consensus disorder prediction 227 279 - -
Lapu8g00788 563 Pfam ENTH domain 27 147 IPR013809 -
Lapu8g00788 563 MobiDBLite consensus disorder prediction 174 304 - -
Lapu8g00788 563 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Lapu8g00788 563 PANTHER EPSIN/ENT-RELATED 4 536 - -
Lapu8g00788 563 MobiDBLite consensus disorder prediction 201 226 - -
Lapu8g00788 563 CDD ENTH 28 144 - -
Lapu8g00788 563 SMART enth_2 26 152 IPR013809 -
Lapu8g00788 563 MobiDBLite consensus disorder prediction 174 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00788 Lapu-Chr8 25925283 25932804 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00788 K12471 - gmx:100809198 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00788 8 25925283 25932804 Lapu8g00788 8 25925283 25932804 ECH