Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01573 ATGGATTCTGTGGATGATCACATCGTGAGTGGTGTTGAAACTGGTGCTAACTACGATGTTGCTGTTTCCTCCGACCCTTCAACGAGAAACATTGAAGAAGAAGAAGAAGAAACAATGAGGGTGAGAGAAAAGAATGAAGAAGATGAAGAAGAAGTGTTGACAGTGGAGGCACTGGAGACAAGGATGTGGAGAGATCGCGTGATGTTGAGGAAGCTTAAGGAAGAGAAGAGGGATAAGGAGAAAGGAGAAACATTGGAGATGATAAAGAAGAAGGCATTGATTCGTGCACAAGACACGGTGCTGAAGAACATGTTGGAGATGATGGAGTTTTGTGATGTTCGTGGCTTTGTTTATGGAATCATTCCTGAGAAGGGAAAACCAGTGAGTGGAGCTTCTGATAACCTAAGAGGTTGGTGGAAGGACAGGGTCAAGTTTGATCATAATGGTCCTGCTGCTATGCTCAGGTACGAGGAAGAAACTGGGTTTGAAGAGATGGTTGGTGATGCATTCAATGGAGAGCCATCAACAGCATACAGGTTGAGTGATCTCGCAGACACAACTCTTGGATCACTCTTGTCATGTCTGATGCAGAACTGTGAGCCTCCCCAGAGGAGGTACCCTTTGGACAAGGGTATTGCCCCTCCCTGGTGGCCCACTGGGCAGGAGTGGTGGTGGGCCGAGATGGGCTTTACCACGGACCCAGGCCCACCTCCCTACAAGAAGCCACATGACCTCAAGAAGGTGTGGAAGATGTGTGTGCTCACTGCAGTCATCAAACACATATCCCCTGACATAGCAAAGATCAGCAACATTGTGCGTCACTCTAGGACCCTTCAGGACAAGCTCACTGCTAAAGAAACTGCCATTTGGAGTGCTATTGTGAAGCGTGAAGAGTCCTTTGCTAGGAGGTCATATCCTCATTTGTTCCAAACCCTCCAACTGAGAGCAGGACTTAGTGTGCCAACTATTGGTTATGATAATGCTACAAATTTTCTTGTGGGGCAACAAAGTAACCTTGGTGGTGCAATGAATTTTCTTGGGGGTCAGAATAGCAACATACCACAAGCCAACAATGTTGCTAATGCTGGTGCTTGGAGCTTTCTTGGTGGCCAGAATAACCTATCAACTTCTACCAATGCTGCTAGAATTCTTCTTGGGAGCCAAAATAACCTTCCACCAACCACCGCTTTGACAGATGGTGGTGCTACAAGTTTTCCTGGAGCACCAGCCACCAATGTTGCTAATGGTGGAGCTAGAAATTTCTTTGTGGGGCAGTTCGATCCACCTACACCAACACCAACACCAACGCCAACACCAACAAGCAATTTGGTTAATAGTGGACTGAGAGCTTTTCTGGAGGGCCAATGTAACCCACCACCACCAACAAGTAATGTTGCTATTAGTAATGGCAATAACAATAATATGGTTACAATGATGAACAATGGCATTGTTATGCCACTTGACCATGCTGCTGATAAGAGAAAGGCTGGGGCTGATCAAGCTGTTACATTTCCTCATGAGGCATATTCTTGCCATAGCACCGAGTGCCCTTATCATGAGACTGGCTTTGGGTTCAGTGACAGGAATGTGAGGAATAATCATCAGCTGACATGCCAATACAGAAGCAAAAATCCTTTGCAAGTGGCTGGAGTTGAAGAGTTAATGCCTTCTCAGCTTGGATGTGGTGGCAATCCTAATGTAAATCCGCCTCTTGGTCAATTTCCCGCATCAGTTATTAATCAAAATCAGACTTTTACTGTTGGTCAACCTGGGGACAACGCTGGAGAAATGGGGTTTGGTGTGATGCACAACATGAATGTTCCTCCTCTAGCAGACCAAAACCAGAATGTGCAAACTGTTCAGACTCAGTTGTACAATAATAATTTCTTTGATGGAAGGGTTTCTTTGGACAAGGATATCTTTAGCAACAGCATGTATGTTCCTTCTCTGGCAAGCAAAAACCAGCCGCAGGTGCAAAATGTTGGTGACACCAGTGGCTACAGTCTGAATGATGAAGTGTCAGTGGATGACAACTTGTCAACATCGAAAATATTAGATTCTCCCTTTGCATGGGATGCAAACAATTCCCAAGCTGAATTTTTGGACTCTATTTTGTTGACAACACCAGACCAGGATTTCCTTTTGCCATACAGTTAA 2157 0.4525 MDSVDDHIVSGVETGANYDVAVSSDPSTRNIEEEEEETMRVREKNEEDEEEVLTVEALETRMWRDRVMLRKLKEEKRDKEKGETLEMIKKKALIRAQDTVLKNMLEMMEFCDVRGFVYGIIPEKGKPVSGASDNLRGWWKDRVKFDHNGPAAMLRYEEETGFEEMVGDAFNGEPSTAYRLSDLADTTLGSLLSCLMQNCEPPQRRYPLDKGIAPPWWPTGQEWWWAEMGFTTDPGPPPYKKPHDLKKVWKMCVLTAVIKHISPDIAKISNIVRHSRTLQDKLTAKETAIWSAIVKREESFARRSYPHLFQTLQLRAGLSVPTIGYDNATNFLVGQQSNLGGAMNFLGGQNSNIPQANNVANAGAWSFLGGQNNLSTSTNAARILLGSQNNLPPTTALTDGGATSFPGAPATNVANGGARNFFVGQFDPPTPTPTPTPTPTSNLVNSGLRAFLEGQCNPPPPTSNVAISNGNNNNMVTMMNNGIVMPLDHAADKRKAGADQAVTFPHEAYSCHSTECPYHETGFGFSDRNVRNNHQLTCQYRSKNPLQVAGVEELMPSQLGCGGNPNVNPPLGQFPASVINQNQTFTVGQPGDNAGEMGFGVMHNMNVPPLADQNQNVQTVQTQLYNNNFFDGRVSLDKDIFSNSMYVPSLASKNQPQVQNVGDTSGYSLNDEVSVDDNLSTSKILDSPFAWDANNSQAEFLDSILLTTPDQDFLLPYS* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01573 718 MobiDBLite consensus disorder prediction 15 47 - -
Lapu5g01573 718 FunFam Ethylene insensitive 3-like 1 171 308 - -
Lapu5g01573 718 MobiDBLite consensus disorder prediction 33 47 - -
Lapu5g01573 718 Coils Coil 31 51 - -
Lapu5g01573 718 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 36 312 IPR006957 GO:0003700|GO:0005634
Lapu5g01573 718 Pfam Ethylene insensitive 3 57 298 IPR047091 GO:0003700
Lapu5g01573 718 Gene3D - 83 158 IPR023278 GO:0003700|GO:0005634
Lapu5g01573 718 SUPERFAMILY DNA-binding domain of EIN3-like 178 301 IPR023278 GO:0003700|GO:0005634
Lapu5g01573 718 Gene3D - 175 308 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01573 Lapu-Chr5 28912618 28915439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01573 493 558 EIL Transcription Factor Family AT2G27050 31.081 4.01e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lapu5g01573 EIN3 5.7e-102 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01573 5 28912618 28915439 Lapu5g01573 5 28912618 28915439 ECH
Lapu6g02853 6 32488824 32492471 Lapu5g01573 5 28912618 28915439 ECH