Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1804 ATGTTGAAGATGAATAGTGCAGTGAAGATAGGTTCAGGTCGTACGGTGGCAGTGGCAATTGAGAATAACAAGACAAGCCAATATGCTGCCAAATGGGCTGTTGATAATCTTGTTACTAAAGATCAATCTCTCTTTCTAATCCATGTTAGAACAAAACTATCTGATTCCAAGTCATATTTCAACCAAGATGGTCCTAAACCCGACAAGGAATCAAAGGATCTTTTCGATTCATTTCGTATCTTCTTCAATAGAAAGAGTGTACAATGCAAAGAATTGTTGTTAGAGGACACAGATATATGTAAGGCCTTAATAGAAAGCATGCACACATATTCCATAGAGCTTATGGTATTGGGGGCACCATCAAGAAGTGGCATTGTTAGGAGATTTAGGACATCAGATGTGCCAAGCAATGTGACAAAAGTGGCGCCTCCATTCTGCACTATTTATATCATTTCCAAAGGAAAAGTTTCATCTGTCAAAACTTCTACTGCTCCACTTCTATCTGCTAAAACTACACCTTCACCTGCACCTACACCTACAACAATCCATAATGGTTACCAATTTCACCCGCAACTGGCATCGCAAAGTGTTGGCGATAGAATAATCGATTCGCAATCAATGCGCAATTACCCACCACCATTGGCATTAACAGAGAAGCCATCTTATGGGACACGCCATGTCCCAGATGAGGATGATTTCATATCACCATTCACAAGAGCTGGCAGATCATATGAGTCATCATTAGCTCCAGATTCAGATATATCATTTGTGAGCAATGGAAGGCCAAGTGTTGATCGATTGTTCCCTTCATTACATGATGATATGGATGGTGGAAGGCTTTCATATACCTCAGATTTTGATGTCAGAAGTAGTTTTGGTTCAGCCATGTCGGGAGGAGGACTTAAATCAATTGACATGTGCTCTCCGATGCCTATGCGTGAATTCCCATTCACCTCACAAAGCAATACTACCGTGTCATCATTGAGATTATCCAACCCCACCGATGAAGTGGAAGCAGAGATGAGGAGATTGAAGCTAGAACTGAAGCAGACAATGGAAATGTATAGTACAGCCTGCAAGGAAGCCTTAACAGCAAATCAGAAGGCAATGGAACTTCAACGTTGGAAAATGGAAGAACAAAAGAAATTGGAAGAGGCTCGAATAGCTGAAGAAGCAGCGTTGGGACTTGTAGAGATGGAAAAAGAAAAGTGTAGAGCAGCATTGAAGGCTGCAGAACAATCTCAGAGGATCGCAGAGTTGGAAGGACAAAAAAGATTGAATGCAGAGATGAAAGCTCAAACAGAGAGGAAGAAGGGAGGAGATTCTTTTGCACCTGGTAGTGCCAGGTACAGGAGGTACACTATAGAGGAAATTGAAGAGGCAACAAAATGCTTTTCTGACACTCTCAAGATCGGCGAAGGAGGTTATGGTCCTGTATACAGGACTGAACTCGATCACACACCGGTTGCAATTAAAGTTCTCAAGCCAGATGCGGTTCAAGGACGTGCTCAATTTCAGCAAGAGGTTGAAGTGTTAAGTTGCATAAGGCATCCAAACATGGTTCTCCTACTTGGAGCATGTCCAGAGTATGGATGCCTAGTTTATGAGTACATGGCTAATGGAAGCTTGGATGATTGCCTCTTCCGGAGGGGCAAGTCACCACCACTTCCTTGGCAGTTAAGATTCCAGATTGCTGCAGAGATAGCCACAGGTCTCCTTTTCCTTCACCAAACAAAGCCAGAGCCGTTGGTGCACCGTGACTTAAAACCTGGCAACATTTTGCTTGATCGCAACTATGTGAGCAAGATAAGTGATGTAGGATTGGCTAGACTTGTCCCTCCTTCAGTGGCAGACACTGTGACTCAGTATCGAATGACATCTACTGCCGGAACCTTCTGTTACATTGACCCTGAATACCAACAAACTGGTATGCTAGGTATTAAGTCTGATATTTACTCACTGGGGATCATGCTTCTACAATTGGTAACAGCCAAGCCACCAATGGGGTTGACTCATCATGTTGCAAGATCCATTGAAAAAGGGACTTTTGGTGAGATGCTTGACCCAGCTATTGATGATTGGCCACTTGAACAGGCATTGCATTTCGCCAAACTTTGCTTGCAATGTGCTGAAATGCGGAGAAAAGATAGACCTGATCTTGGAAAAGTAGTATTACCTGAGATCAATAAACTTAGAGCATTTGCTGAAGAAAACATGCCTGTCTTCATGTATGGAGGTAGTACAGGATTCGCTCCCAGAACTAGCAATGCTTCCATGTATTCTTCTTCCACACATCAAAATGAATCCCACCAATCCCAATCCCAGTCACTGTCTGGAATGTCTGGATATGAAAGTCGCTCAAGCACATCATCATCATCACAGGGGAGAATGTAA 2394 0.4294 MLKMNSAVKIGSGRTVAVAIENNKTSQYAAKWAVDNLVTKDQSLFLIHVRTKLSDSKSYFNQDGPKPDKESKDLFDSFRIFFNRKSVQCKELLLEDTDICKALIESMHTYSIELMVLGAPSRSGIVRRFRTSDVPSNVTKVAPPFCTIYIISKGKVSSVKTSTAPLLSAKTTPSPAPTPTTIHNGYQFHPQLASQSVGDRIIDSQSMRNYPPPLALTEKPSYGTRHVPDEDDFISPFTRAGRSYESSLAPDSDISFVSNGRPSVDRLFPSLHDDMDGGRLSYTSDFDVRSSFGSAMSGGGLKSIDMCSPMPMREFPFTSQSNTTVSSLRLSNPTDEVEAEMRRLKLELKQTMEMYSTACKEALTANQKAMELQRWKMEEQKKLEEARIAEEAALGLVEMEKEKCRAALKAAEQSQRIAELEGQKRLNAEMKAQTERKKGGDSFAPGSARYRRYTIEEIEEATKCFSDTLKIGEGGYGPVYRTELDHTPVAIKVLKPDAVQGRAQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGKSPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVARSIEKGTFGEMLDPAIDDWPLEQALHFAKLCLQCAEMRRKDRPDLGKVVLPEINKLRAFAEENMPVFMYGGSTGFAPRTSNASMYSSSTHQNESHQSQSQSLSGMSGYESRSSTSSSSQGRM* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1804 797 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 9 792 - -
Lan6g1804 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Lan6g1804 797 Pfam Protein kinase domain 468 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1804 797 Gene3D Phosphorylase Kinase; domain 1 446 537 - -
Lan6g1804 797 PANTHER OS02G0152300 PROTEIN 9 792 - -
Lan6g1804 797 ProSiteProfiles Protein kinase domain profile. 465 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1804 797 SMART serkin_6 465 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1804 797 CDD STK_N 15 154 - -
Lan6g1804 797 MobiDBLite consensus disorder prediction 755 797 - -
Lan6g1804 797 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 132 - -
Lan6g1804 797 Gene3D Transferase(Phosphotransferase) domain 1 538 740 - -
Lan6g1804 797 Pfam Universal stress protein family 14 138 IPR006016 -
Lan6g1804 797 Coils Coil 334 354 - -
Lan6g1804 797 Gene3D HUPs 14 151 IPR014729 -
Lan6g1804 797 SUPERFAMILY Protein kinase-like (PK-like) 446 723 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1804 Lan-Chr6 29382614 29386169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1804 3 769 Receptor kinase-like Gene Family AT1G78940 53.367 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan6g1804 Pkinase 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1804 - - cam:101511100 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1804 6 29382614 29386169 Lan3g0538 3 5491982 5493797 LSH
Lan6g1804 6 29382614 29386169 Lan3g1162 3 23877615 23879627 PCT
Lan3g1162 3 23877615 23879627 Lan6g1804 6 29382614 29386169 PCT