Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0544 ATGGATTTCATGAAGGTCTTCGATCAAACCGTCCGAGAAATAAAGAGGGAGGTGAATTTGAAGGTGCTCAAGGTTCCTGAAATAGAACAGAAGGTGTTGGATGCAACTGATAATGAACCATGGGGTCCTCATGGTTCTGCGCTGGCAGAAATTGCACAGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACACGACTAAGTGAAACCGGAAAGGATTGGCGTTATGTATACAAGGCATTAGCTGTTATAGAGTATTTGATATCACATGGATCTGAACGAGCAGTTGATGACATTATCGAACATACTTTTCAGATCTCAGCACTATCAAGTTTTGAGTATGTTGAGCCTAATGGGAAGGATGTCGGACTCAATGTCAGGAAGAAGTCAGAAAACATTGTAGCCCTTTTAAATGATAGAGATAAGATACAAGAAGTCAGAAATAAAGCTGCGTCAAACCGTGACAAGTTCATTGGAGTTTCTTCTAGTGGGATCACATACAAGTCTGGGTCAGCCTCATTTAGTAGTGGAAGCTTTCAGAGCAATACTAAATATGGAGGCTTTGGATCAAGAGATGATGACAGGTTTAGAGATAGCTATAGAGACAAGGGGAACTATGAAGAACAAAAGGTTAAGAAAGATCAAGATAACTCCTTCAAAAAGCATTCTGCACGATCTGCCAGCAAAAGTCAAGAGAAGATGTCATCTGGAGTATCAAAATCATCTACTAATGCAGATGTATATGATAGCTATAATTCAGTTCCTTCTCAGAGTGCAGGTGCAAACAATACTGAAGATAACTTTGATGATTTTGATCCAAGAGGAACTTCTACAAGTAAGTATTATGAACAGTCTCCCATGTTTCTGTTATATGTGTGA 894 0.3915 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSALAEIAQATKKFTECQMVMNVLWTRLSETGKDWRYVYKALAVIEYLISHGSERAVDDIIEHTFQISALSSFEYVEPNGKDVGLNVRKKSENIVALLNDRDKIQEVRNKAASNRDKFIGVSSSGITYKSGSASFSSGSFQSNTKYGGFGSRDDDRFRDSYRDKGNYEEQKVKKDQDNSFKKHSARSASKSQEKMSSGVSKSSTNADVYDSYNSVPSQSAGANNTEDNFDDFDPRGTSTSKYYEQSPMFLLYV* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0544 297 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 286 IPR033521 GO:0006623|GO:0030276
Lan3g0544 297 MobiDBLite consensus disorder prediction 189 285 - -
Lan3g0544 297 Pfam ENTH domain 27 147 IPR013809 -
Lan3g0544 297 SMART enth_2 26 152 IPR013809 -
Lan3g0544 297 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Lan3g0544 297 MobiDBLite consensus disorder prediction 234 270 - -
Lan3g0544 297 PANTHER EPSIN/ENT-RELATED 1 286 - -
Lan3g0544 297 CDD ENTH 28 144 - -
Lan3g0544 297 MobiDBLite consensus disorder prediction 193 233 - -
Lan3g0544 297 Gene3D - 24 164 IPR008942 -
Lan3g0544 297 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0544 Lan-Chr3 5618759 5623228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0544 K12471 - gmx:100789110 436.032