Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0531 ATGGATCCTGAGGTTGTGGGTTTTGATGGGTTGGTTGGTTCAGATCCTGAAACAAAGCACAAGTTGTATGGATCTGGTGGGTTCCTTAAGCAAGAAAGATCTAGTGCCAATGTTGAAGATGAATGGAGAAGTTCCAAAGTTGCTAAGACTAATGATGATGATATATCTGGTTCTTCTTCCAAAGCAATGTTGTTTCAACAAAGAAACTCTTTGTTGAGATCTTGTAATAATAATAATGGCACTGTTTTTTGTGATGGTCAGCAACAAATGCTGAGTTTCTCTTCTCCTAAACCAGAAACTTCATCAAATGCTACATTGCATTTTTCTTACCAACCTTATAGCAGAGATGCAGGTTATAGTTCAGGAAGCATTATACATGGTACTATAACAGGGGGTAGAGGGCTATTCACTCCATCACAGTGGATGGAGTTGGAACACCAAGCTTTGATCTACAAATACATAACAGCAAATGTGCCTGTACCTTCTCATTTGCTCATTCCTATTAGAAAAGCCATTGATTCTGCTGGATTCTATAACTTTTCAACTGGAGTTCTTAGACCCAATGCATTGGGATGGGGAGCTTTCCATTTTGGATTCTCAAACAACACTGATCCTGAGCCAGGAAGGTGTCGTAGAACAGATGGGAAGAAATGGCGGTGCTCTAGAGATGCTGTCGTGGACCAAAAGTATTGTGAGCGCCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAACAAGGCCATTTAGGCCATGCTGGCATTGTCACCGCATCCGGGACCACCGCCACTACAACCACTACTCCAAATACCACAACATGTGCATCCAACAGCCTTAACTTTGTACCACATCAGGAGCATAAGAATATGCAGCTCCCTCTTGCATCCGATACTTCTCCAACCATCAACATTAACAGGATTTTTATGAATAAGGACAAAGAGAATGATGCAAGTGAGAGAATGCAAGATAGTTCTTCACTTCCAATGCTGCCTCCAACTCTTGAGCTGAAACCAAAGGAAAACAACACTTTTATGATTCATAAACAGCAAATCCAATCATTTGAGGGATCCACAAGGAATGATAATGAGTTTGGGCTTGTCACTTCTGATTCCCTACTCAACCCTTCTCAGAAAAGCTCCACTTTGCTTGGTAGCCGAAGCTTTAGTTCCTCACATAACCAAGAAACTGAGCCGCAACATTCCCTCAGGCATTTCATTGATGACTGTCCCAATGATGACATGCAATCGGATAGTACACAACTATCGATTTCCATCCCAATGGCTGCTTCCTCAGATTTCATGTCATTCTCGTCCTCAACCCGGACTGATGAAAAGCTCACACTGTCACCACTAAGGCTATCAAGGGAGTTAGATCCAATTCAAATGAGTTTGGGTACGGGAAGTTCCATCGATGAATCAAATACTAGGCAAGCTAACTGGATTCCAATTACATGGGAGAGTTGTTCTATGGGTGGTCCTCTTGGAGAAGTGCTGAATCTTAGTAACAATAATAATAACAATGCAAGTGATCATTGTTCAAAAAATTCCTCTGCTCTCAACCTTATGACCGATGGGTGGGACAATAGTCCTCCAATAGGATCATCCCCTACCGGAATATTGCAGAAAACAGCATTTGGGTCACTTTCCAATAGCAGTGCTGGAAGCAGTCCAAGGGCAGTAGATACCAATAAGACTCAAGAAAGTGCCACCTTTTGCAATGAACTCATTGGATCAACCATGAAACCCTTGTTGTAA 1758 0.4238 MDPEVVGFDGLVGSDPETKHKLYGSGGFLKQERSSANVEDEWRSSKVAKTNDDDISGSSSKAMLFQQRNSLLRSCNNNNGTVFCDGQQQMLSFSSPKPETSSNATLHFSYQPYSRDAGYSSGSIIHGTITGGRGLFTPSQWMELEHQALIYKYITANVPVPSHLLIPIRKAIDSAGFYNFSTGVLRPNALGWGAFHFGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEQGHLGHAGIVTASGTTATTTTTPNTTTCASNSLNFVPHQEHKNMQLPLASDTSPTININRIFMNKDKENDASERMQDSSSLPMLPPTLELKPKENNTFMIHKQQIQSFEGSTRNDNEFGLVTSDSLLNPSQKSSTLLGSRSFSSSHNQETEPQHSLRHFIDDCPNDDMQSDSTQLSISIPMAASSDFMSFSSSTRTDEKLTLSPLRLSRELDPIQMSLGTGSSIDESNTRQANWIPITWESCSMGGPLGEVLNLSNNNNNNASDHCSKNSSALNLMTDGWDNSPPIGSSPTGILQKTAFGSLSNSSAGSSPRAVDTNKTQESATFCNELIGSTMKPLL* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0531 585 MobiDBLite consensus disorder prediction 548 567 - -
Lan3g0531 585 Pfam QLQ 136 169 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan3g0531 585 Pfam WRC 205 247 IPR014977 -
Lan3g0531 585 PANTHER GROWTH-REGULATING FACTOR 9 17 564 - -
Lan3g0531 585 MobiDBLite consensus disorder prediction 34 50 - -
Lan3g0531 585 MobiDBLite consensus disorder prediction 367 397 - -
Lan3g0531 585 MobiDBLite consensus disorder prediction 313 332 - -
Lan3g0531 585 ProSiteProfiles WRC domain profile. 204 248 IPR014977 -
Lan3g0531 585 PANTHER - 17 564 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lan3g0531 585 MobiDBLite consensus disorder prediction 31 58 - -
Lan3g0531 585 SMART QLQ_2 134 170 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan3g0531 585 MobiDBLite consensus disorder prediction 367 400 - -
Lan3g0531 585 ProSiteProfiles QLQ domain profile. 135 170 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0531 Lan-Chr3 5226395 5231213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0531 24 547 GRF Transcription Factor Family AT2G22840 43.284 1.67e-106 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan3g0531 WRC 5.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0531 - - gmx:100818860 673.315