Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0530 ATGGCCAATAATTCTCAGCCCCCTGGTATGCAGTTTCGGCCAGTCATTCAATCTCAGCAAGGGCAACCATTTGTTCCAATGACTTCACAACAATTTGGACATGCAGGACATGCTATACCGTCTTCAAATGTTGTTCAGAGTCAGCAAGTGCAGTATTCTCAACCAGTGCAACAGTTGGCTCCAAGACCAATTCAGCCCGGTCATCCTGCACCTTTATCCCAGGCTCCTATGCCATATATTCAGACAAGTAGGCCACTGACATCTGCTTCACCACATTCACAGCAAATGGTTTCCCACTTAAGCAATCATATGCCTGGCTTGGCTGTGTCAGGAGCACCTCCACACCCTTCATATACTTTCACACCATCCTATGGTCAGCAGCAAGATAATGCTAATGCATTGGCTCAATACCAGCCTCCACCTCAAATGCTTGCACCTCCTGCTGGACAACCTTGGATGTCCTCTGTATCTCAGAGTGCTTCTGCTGTTACACCAGTGCAGCAGGGTGGAGTACAGTCATTGGATTCTACATCAACTGATGCAAGAACAAGTGCCCCTAACCAGCAGTCCTTATCTGATTGGCAAGAGCATACTTCTGCAGATGGAAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCTTTGGAATTGATGTCACCTATTGAGCGGGCAGATGCATCAACGGTGTGGAAAGAATTCACTTCTTCAGATGGAAAAAAGTATTATTACAACAAGATTACTCAGCAATCAACATGGTCAATACCAGAGGAACTTAAGTTGGCTCGTGAACAGGCACAGAAAGCTGTGAACCAGGGAGTCCAGTCAGAAACAACTGATGCATCCAATGCTGCCGTCTCCTCTAATGCAACATCAACCGATGCTAATGTAGCTATTTCCAACACTTCTTTGACATCAAATGGGATTGCTTCAAGCCCTGCTTCTCTCCCACCTATCGGAGCAGCTGATCCGCAACAGTTGATTTCTGGATCAGGGACCCCTGTTTCCCACTCTATTGTCACTCCTGCCTCCACTGGAGTCGAACAAAGTACTGTTACCATGACAATCACGGAACCTATAACAGTTGCAGGAAGCTCAGGAGCAGCTACAGATTCACTTGATTCCAAAGTGCCATCCATTGTTGAAAATCAAGCATCTCAAGATTTTGCTACATCCGTCACTGGAGCTTCTCTTCAAGATATTGAGGAATCCAAAAGAGGAGTGACAGGGGTTGGAAAAATTAATGTGACTCCTCCTGAGGAGAAGGCCGATGATGATGAAACTTTGGTCTATGCGAATAAACTGGAAGCAAAAACTGCATTTAAAGGGCTTTTGGAATCTGCGAATGTTCATTCTGATTGGACATGGGAACAGGCAATGAGAGAAATCATTAATGACAAAAGATATAATGCTCTAAAAACACCTGGTGAACGAAAACAAGCTTTTAATGAGTATTTGGGCCAAAGGAAGAAGCTAGAGGCTGAAGAGAGGCGCATGAAGCAGAAAAGAGCTCGAGAAGAATTCACTAAGATGTTGGAAGAGTGCAAAGAACTTACATCATCCATAAGGTGGAGCAAAGCTATAAGTATGTTTGAAAATGATGAACGATTCAATGCTGTTGAAAAACAAAGAGACCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAATTGCTGCAGAGGAGCACAGGCAGAATGTAGCAGAATACAGGAAATTCTTAGAGTCCTGTGATTATGTGAAGGTGTATAGTCAGTGGCGGAAAGTCCAAGATCGGTTAGAGGATGATGATAGATACTTGAGACTTGAAAAAATTGATCGCTTGCTTGTTTTCCAGGACTATATACGTGACTTGGAGAAGGAAGAAGAGGAGAAAAAAAGAATACAGAAGGATCGAGTCCATCGGGGTGAAAGGAAAAACCGTGATGCATTTTGCAAGTTGCTGGAAGAACATGTTGCCGCTGGAGTTCTGACTGCTAAAACTCAATGGAGAGAGTATTGCTTGAAGGTCAGGGATTTGCCTCAATATCAAGCTGTTGCGTCAAATACATCTGGTTCCACTCCAAAAGAAATATTTGAGGATGTTGCTGTAGAACTTGAAAACCAGTATCATGAAGACAAGACACTCGTAAAAGATATAATCAAGACATGCAAGATTACTGTAGTGTCTACATCATTGTTTGAGGACTTTAAGTCTGCTGTCTTGGAAGAAGGTAGCAAAACAATATCTGAGATCAATTTGAAGCTTGTATACGAAGAGTTGCTAGAGAGAGCCAAGGAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTTGCTGATGATTTCACTAACTTGTTATATACATTTAAGGATATTACTACTTCTTCACAATGGGAGGATTGCAAGCCACTCTTTGAAGAGACACAAGAGTACAGGTCCATTGGGGATGAAAGCTACAGTAGAGAAATTTTTGAACAGTACATTACATACTTGGAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGATGAAAAGGCTAAAAAAGAGAAAGAAAAGGAAGAGAAAGAAAAACGGAAGGAGAAGGATAGAGAACGTGAGAAAGAAAAGTCTAAGGAAAGACATAAGAAGGTTGACACAGATAGTGAAAATCAGGAAGTAAATGACAGCCATGATTACAAGGAGGAGAAGAAAAAAGAAAAGGATAAGGAAAGGAAACATCGGAAGAGGCGCCAGAGCAGCATAGAGGATGTGGATTCTGAAAGGGATGAGAAGGAAGAATCTAAGAAATCACGAAGACATGGCAGTGACCGCAAGAAGTCTAGGAAGCATGCAAACTCTGAATCAGATAACGAAAGTAAGCATAGAAGACACAAGAGGGAGCACCGGGATGGTTCCAGAAAAACTGGGGGCCATGTGGAGCTTGAAGACGGGGAGCTCGGTGATGATGGTGATATTTAA 2973 0.4282 MANNSQPPGMQFRPVIQSQQGQPFVPMTSQQFGHAGHAIPSSNVVQSQQVQYSQPVQQLAPRPIQPGHPAPLSQAPMPYIQTSRPLTSASPHSQQMVSHLSNHMPGLAVSGAPPHPSYTFTPSYGQQQDNANALAQYQPPPQMLAPPAGQPWMSSVSQSASAVTPVQQGGVQSLDSTSTDARTSAPNQQSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGKKYYYNKITQQSTWSIPEELKLAREQAQKAVNQGVQSETTDASNAAVSSNATSTDANVAISNTSLTSNGIASSPASLPPIGAADPQQLISGSGTPVSHSIVTPASTGVEQSTVTMTITEPITVAGSSGAATDSLDSKVPSIVENQASQDFATSVTGASLQDIEESKRGVTGVGKINVTPPEEKADDDETLVYANKLEAKTAFKGLLESANVHSDWTWEQAMREIINDKRYNALKTPGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTSSIRWSKAISMFENDERFNAVEKQRDREDLFESYMVELERKEKEIAAEEHRQNVAEYRKFLESCDYVKVYSQWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEKKRIQKDRVHRGERKNRDAFCKLLEEHVAAGVLTAKTQWREYCLKVRDLPQYQAVASNTSGSTPKEIFEDVAVELENQYHEDKTLVKDIIKTCKITVVSTSLFEDFKSAVLEEGSKTISEINLKLVYEELLERAKEKEEKEAKKRQRLADDFTNLLYTFKDITTSSQWEDCKPLFEETQEYRSIGDESYSREIFEQYITYLEEKAKEKERKREDEKAKKEKEKEEKEKRKEKDREREKEKSKERHKKVDTDSENQEVNDSHDYKEEKKKEKDKERKHRKRRQSSIEDVDSERDEKEESKKSRRHGSDRKKSRKHANSESDNESKHRRHKREHRDGSRKTGGHVELEDGELGDDGDI* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0530 990 MobiDBLite consensus disorder prediction 839 906 - -
Lan3g0530 990 MobiDBLite consensus disorder prediction 151 196 - -
Lan3g0530 990 MobiDBLite consensus disorder prediction 913 937 - -
Lan3g0530 990 MobiDBLite consensus disorder prediction 839 990 - -
Lan3g0530 990 CDD WW 235 262 IPR001202 GO:0005515
Lan3g0530 990 Gene3D FF domain 772 847 IPR036517 -
Lan3g0530 990 SUPERFAMILY WW domain 193 227 IPR036020 GO:0005515
Lan3g0530 990 Gene3D FF domain 438 493 IPR036517 -
Lan3g0530 990 ProSiteProfiles FF domain profile. 505 560 IPR002713 -
Lan3g0530 990 ProSiteProfiles FF domain profile. 573 627 IPR002713 -
Lan3g0530 990 SUPERFAMILY FF domain 565 634 IPR036517 -
Lan3g0530 990 ProSiteProfiles WW/rsp5/WWP domain profile. 229 262 IPR001202 GO:0005515
Lan3g0530 990 Coils Coil 832 877 - -
Lan3g0530 990 Gene3D - 228 287 - -
Lan3g0530 990 Coils Coil 554 574 - -
Lan3g0530 990 MobiDBLite consensus disorder prediction 319 339 - -
Lan3g0530 990 MobiDBLite consensus disorder prediction 137 197 - -
Lan3g0530 990 Gene3D FF domain 494 568 IPR036517 -
Lan3g0530 990 Gene3D FF domain 637 718 IPR036517 -
Lan3g0530 990 Gene3D FF domain 569 636 IPR036517 -
Lan3g0530 990 CDD WW 192 221 IPR001202 GO:0005515
Lan3g0530 990 MobiDBLite consensus disorder prediction 945 961 - -
Lan3g0530 990 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 6 985 - -
Lan3g0530 990 SUPERFAMILY FF domain 640 715 IPR036517 -
Lan3g0530 990 ProSiteProfiles WW/rsp5/WWP domain profile. 192 221 IPR001202 GO:0005515
Lan3g0530 990 MobiDBLite consensus disorder prediction 104 125 - -
Lan3g0530 990 ProSiteProfiles FF domain profile. 645 708 IPR002713 -
Lan3g0530 990 Gene3D - 188 227 - -
Lan3g0530 990 SUPERFAMILY FF domain 499 567 IPR036517 -
Lan3g0530 990 SUPERFAMILY FF domain 430 492 IPR036517 -
Lan3g0530 990 Coils Coil 621 641 - -
Lan3g0530 990 MobiDBLite consensus disorder prediction 1 75 - -
Lan3g0530 990 ProSitePatterns WW/rsp5/WWP domain signature. 194 219 IPR001202 GO:0005515
Lan3g0530 990 SMART ww_5 230 262 IPR001202 GO:0005515
Lan3g0530 990 SMART ww_5 189 221 IPR001202 GO:0005515
Lan3g0530 990 Coils Coil 754 785 - -
Lan3g0530 990 SUPERFAMILY WW domain 234 267 IPR036020 GO:0005515
Lan3g0530 990 MobiDBLite consensus disorder prediction 1 60 - -
Lan3g0530 990 MobiDBLite consensus disorder prediction 274 295 - -
Lan3g0530 990 Coils Coil 486 509 - -
Lan3g0530 990 Pfam FF domain 440 489 IPR002713 -
Lan3g0530 990 Pfam FF domain 507 557 IPR002713 -
Lan3g0530 990 Pfam FF domain 578 624 IPR002713 -
Lan3g0530 990 Pfam FF domain 649 704 IPR002713 -
Lan3g0530 990 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 6 985 IPR039726 GO:0045292
Lan3g0530 990 Pfam WW domain 192 219 IPR001202 GO:0005515
Lan3g0530 990 Pfam WW domain 235 260 IPR001202 GO:0005515
Lan3g0530 990 ProSitePatterns WW/rsp5/WWP domain signature. 235 260 IPR001202 GO:0005515
Lan3g0530 990 SUPERFAMILY FF domain 780 841 IPR036517 -
Lan3g0530 990 ProSiteProfiles FF domain profile. 438 492 IPR002713 -
Lan3g0530 990 SMART FF_2 505 560 IPR002713 -
Lan3g0530 990 SMART FF_2 779 834 IPR002713 -
Lan3g0530 990 SMART FF_2 647 708 IPR002713 -
Lan3g0530 990 SMART FF_2 438 492 IPR002713 -
Lan3g0530 990 SMART FF_2 573 627 IPR002713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0530 Lan-Chr3 5185815 5198798 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0530 K12821 - gmx:100806019 1388.24