Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0525 ATGGTGTTGCTTTCAGACATATACGACGCGGATGAGCTCGACGAGGAACCCGGCGAGGTGATCGAATCGGCACCGCCTCAAAAGGTTGGCGAAGAGCGACATATCAGTAACTCTGGTCTAAAAAAGAAGCTTCTAAAACGCGGTCATGGATTGGAAACCCCTGACTTCAATGACGAAGTCACTGTTCACTATGTTGGTACGTTGCTTGATGGAACAAAGTTTTATTCAACTAGGGATAGAGATCATCCTCTCACATTTACTCTTGGTCAAGCTCAAGTTGCCACTGGATTGGATTATGGGATAATCACCATGAAGAAGGGAGAGGTATCATTGTTTACATTACCGGCTGAGTTGGGTGTTTCATCCAACTCTGACTCAGTTACGCAGTTTGAGGTGGAACTCATTTCGTGGATCAAGGTCATAGATGTATGCAAAGATGGTGGAGTTGTGAAGAAAATTTTGGAGAAGGGGACAAGGAATGAACGACCTGGTGATCTTGACGAAGTCCTTGTGAATTATCATGTGGCACTAGTTGATGGCAATGTTGTTGCAGAAACACCAGAAGGAGGAGTTCAGTTTCATGTGAAGGATGGTCATCTTTTTCCCGGATTGCCCAAAGTAATCATGTCTATGACAAGAGGAGAGAAGGCTGAATTATTAGTTCAACCTCGGTATGCCTTTGGGGAGAAGGGGAGAGAAGCTAGTGGTGGGCTCCAATCAATCCCTCCAAATTCAGTGCTGCATGTTAATATTGAATTGGTGTCTTTCAAGCCTGTCATAAATGTTACTGGTAATTCCATGGTGCTTAAGAAGATTCTGAAAGAAGGAGAAGGTGCTTTCACAGCAAACGAGGGTGCAAAAGTTACTGTCAGGTACACAGCTATGCTAGAAGATGGAACTGTGTTTGAGAAAAGAGGAATTGGTGAAACACCTCCATTGGAATTCATAACTGATGAAGAACAAGTGATTGCTGGTCTAGACCGAGCAGTGGCAACAATGAAGAAGGGCGAGAGGGCCATAATTAGCATACATCCTGATTATGCATTTAGAAATGTTGAAGTGAGACGAGATTTTGCTATTGTGCCACCAGGCTCAAATGTAGTCTATGACACCGAGATGATGGATTTTATTAAGGAGAAAGCACCATGGGAATTGAGTAGTAATGAAAAAATTGAGGAGGCTGGGAAGAAGAAAGAAGAAGGGAATTTTTTATTTAAAGGGGGCAAGTATCAGCGAGCAGGGAGGAAATATGAAAAGGCTGCTGATTATGTTAGTGAAGATGGATCCTTTGCAGATGATAAGGAAAAACTAGCTAAAGCACTAAGAGTGTCATGCTGGTTAAATGCTGCAGCTTGTAGCCTAAAACTTAATGATTTTCCTGGAGCAATCAAGTTATGTTCACAGGTACTTGATGTTGAATTTCACAATGTGAAAGCTCTGTATAGACGAGCACAGGCATACATAGAGACTGGTGATCTTCTTTCTGCAGATGTAGACATCAAGAAAGCTCTCGAGGTGGATCCACAAAACAGGGAGGTAAAGGTACTTCAGAGGAAATGTAAACAGCTTCAAGCTGAAAATGACAAAAAATATGCTAAGCTCTATGGGAATATGTTTGCACATGAAAGGAAGGACTCATCTATGGTAACAAAGAGATTGAAGGTTGAGAAAGAAGAGGATGAGAGGAAAAAGGAAGAGGTCATGAGAATGGAAATGGAGAAGGTTGCTGATAGTGCAGCTCCTCCTGATGGTGGTTTATTCTAG 1764 0.4235 MVLLSDIYDADELDEEPGEVIESAPPQKVGEERHISNSGLKKKLLKRGHGLETPDFNDEVTVHYVGTLLDGTKFYSTRDRDHPLTFTLGQAQVATGLDYGIITMKKGEVSLFTLPAELGVSSNSDSVTQFEVELISWIKVIDVCKDGGVVKKILEKGTRNERPGDLDEVLVNYHVALVDGNVVAETPEGGVQFHVKDGHLFPGLPKVIMSMTRGEKAELLVQPRYAFGEKGREASGGLQSIPPNSVLHVNIELVSFKPVINVTGNSMVLKKILKEGEGAFTANEGAKVTVRYTAMLEDGTVFEKRGIGETPPLEFITDEEQVIAGLDRAVATMKKGERAIISIHPDYAFRNVEVRRDFAIVPPGSNVVYDTEMMDFIKEKAPWELSSNEKIEEAGKKKEEGNFLFKGGKYQRAGRKYEKAADYVSEDGSFADDKEKLAKALRVSCWLNAAACSLKLNDFPGAIKLCSQVLDVEFHNVKALYRRAQAYIETGDLLSADVDIKKALEVDPQNREVKVLQRKCKQLQAENDKKYAKLYGNMFAHERKDSSMVTKRLKVEKEEDERKKEEVMRMEMEKVADSAAPPDGGLF* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0525 587 ProSiteProfiles TPR repeat profile. 477 510 IPR019734 GO:0005515
Lan3g0525 587 SMART tpr_5 394 427 IPR019734 GO:0005515
Lan3g0525 587 SMART tpr_5 443 476 IPR019734 GO:0005515
Lan3g0525 587 SMART tpr_5 477 510 IPR019734 GO:0005515
Lan3g0525 587 Gene3D - 257 381 IPR046357 GO:0003755
Lan3g0525 587 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 57 138 IPR001179 GO:0003755
Lan3g0525 587 PANTHER PEPTIDYLPROLYL ISOMERASE 260 374 - -
Lan3g0525 587 PANTHER PEPTIDYLPROLYL ISOMERASE 3 263 - -
Lan3g0525 587 PANTHER PEPTIDYLPROLYL ISOMERASE 373 561 - -
Lan3g0525 587 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 285 377 IPR001179 GO:0003755
Lan3g0525 587 SUPERFAMILY FKBP-like 142 257 - -
Lan3g0525 587 Gene3D - 141 256 IPR046357 GO:0003755
Lan3g0525 587 Gene3D Tetratricopeptide repeat domain 382 537 IPR011990 GO:0005515
Lan3g0525 587 Gene3D - 33 140 IPR046357 GO:0003755
Lan3g0525 587 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 373 561 - -
Lan3g0525 587 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 260 374 - -
Lan3g0525 587 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 263 - -
Lan3g0525 587 MobiDBLite consensus disorder prediction 551 573 - -
Lan3g0525 587 Coils Coil 550 575 - -
Lan3g0525 587 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 281 373 IPR001179 GO:0003755
Lan3g0525 587 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 55 125 IPR001179 GO:0003755
Lan3g0525 587 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 163 254 IPR001179 GO:0003755
Lan3g0525 587 SUPERFAMILY FKBP-like 32 140 - -
Lan3g0525 587 Coils Coil 506 533 - -
Lan3g0525 587 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 166 257 IPR001179 GO:0003755
Lan3g0525 587 SUPERFAMILY FKBP-like 263 392 - -
Lan3g0525 587 SUPERFAMILY TPR-like 389 541 IPR011990 GO:0005515
Lan3g0525 587 MobiDBLite consensus disorder prediction 551 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0525 Lan-Chr3 5018148 5025400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0525 28 543 Calmodulin-binding Proteins AT3G25230 55.153 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0525 K09571 - gmx:100798382 832.787