Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0524 ATGGGAGAACTCTACAAAATAAGTTCAATCGATTGGAAACCCTCACCGGTTCTCGCCTTAGCCACCAGCGTCGACGGCTTACGTGTAGCCGCGGCTCGCCAAGACGGTTCGCTTGAAATATGGCTTGTGTCACCTGGCTCCATTGGTTGGCACTGTCAGTTAACTATTCATGGAGATGCTGATAAACGAGTTTCGTCGCTGGTTTGGTGCACCGGTGCGTTGAATGATGAAGCTTGTGGTCGTTTATTTTCGTCTCATATTGATGGTTCTGTTACTAAGTGGGATCTTTTTCATTTGAAGCAAACGACGGTGCTAGATACGGATGGTGTCTCAATCTGGAAAATGGCTGTGACCCTTCCGAAGAGGGATGTTATAAATTCCGAAACAAAAAACAATCATGTTGGAAATGGATTCGTGAGTAAATTTCACGATTCCGATGAACACGATGAGAACAGTGAAAGTGATGAAGATTCTGACTCAACTGATACAATGAAGCAATCTGTTATTGAGTATCCACGTGTAGCGATTGCTTATGATGATGGATGTGTGCGGATTTATGCCATCTCCGATACAGACGATTTTATGTATGTAAAATCCTTGCCTCGGGTCAAAGGACGAGTTTTAAGTGTCACTTGGAGCGCAGATGCCAACCACATATTTTCTGGCAGTAGTGATGGGCTAATACGATGCTGGGATGTTATATCGGGCCATGAAGTCTATAGGATTACAGCTGGACTTGGAGGTTTGGGCAGTGGACATGATCTTTGTATATGGTCATTACTGTCCTTAAGGTCTGGGGCACTTGTTAGTGCAGACAGCAGTGGTAGTGTCCAATTCTGGGACAGCCAACATGGAACTCTCTTGCAAGCACATTCATTACACAAAGGAGATGTAAATGCTCTGGCGGCAGCACCTGGTCATGATAGGGTGTTTTCTGCTGGTTCTGATGGTCAGGTTATTCTTTATAAGCTGTCTAGTCAGTCAGCGTCATCTGATGGTGTCAATTCTCCGATTATGATGAAAAAGTGGATCTATGTTCAAGGTGTAAGGGCTCATACGCATGATGTCTGGGCCTTGACTGTCGCTGTACCAATAACTCAAGAAGATGCTTTGCCAGATGAGAGGGTTAAAAGAGCTCGACGTGAAGAAAAACCTGTTGAGTTTAGTTACCATAAGTGGGCTCATTTGGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACTAAACTCTTTGCATACCCTGTGAAAGAATTTACTAAATTTTCTCCTCATGATATCTGTCCTGCTCCTCAAAGAACACCTATTCAACTAGTTCTTAATACTGCCTTCAATCAATCCTCAATGCTTTTAGTGCAGTCTTCACATGGGTTAGATGTCCATTTGCTACAACTCAGAAACGTTCACACAGCTGGAGGCCGTGCAAAGACTGAAATGCTTGCCCGAGTCAAAAGTAAGGCTTCTCAAAAGATAATTTGCAGCACCATTTCTAATTCAGGGACGCTTTTTGCATACTCGGACCATTTGAAGCCTAATCTCTTTGAATTGAAGAGGTCTGAAGGTGGGAAAGTTACATGGAGTGTCAGTAAAAGGAAACTTCCTTCCAGATTACCATTTGCTCATTCCATGATTTTTACTCATGACTCCTCTTGGTTGATAGTAGCTGGGCATGATAGAAGGATATACGTTGTGGATGTCAGAAGCTCAGAACTGGTGCATACTTTTACACCTTGTCGGGATTTGCAAGATGAAAAACTACCTCCAACGGAGCCTCCGATAACAAGATTGTTCAGCAGTTCTGATAAGCAGTGGTTGGCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAACTTGGAGATACTAAGGCAGCATTGGTTCATTTCACGATTAGATGGTGCCTCTGTTACTGCTGGTGGATTTCCTCCCCAGAACAGCAATGTAATGATAATTACAACCTCCTCAAATCAAGTGTATGCATTTGACATAGAGGCCAAGGAGTTGGGAGAATGGTCAAAGCGTCACACTTATGTTCTTCCCAGGAGATACCAGGAATTTCCTGGTGAAGTGATTGGGCTCTCTTTTCCTCCCTCATCGACTTCATCTTCAGCTGTTGTTTATAGCTCCAGGGCAATGTGTTTGATTGACTTCGGGTTGCCCGTGGAGCAAGATGATAATGATATGCTAAATATTCAAGATCCAAGGGCCAAGAGTTCCCAAAATCTCAGTGTCAAGAGGAAGATTAAGCATAAGAACTTCAATGTTTTGCCATTAGAGAATCCAGTTTTATTTCTAGCCTACATGTCGAAAAATTCCTTCTTTATGATAGACAAACCTTGGTTGGAAGTTGTCAAAAGTTTAGAAGCCCCACCAGTCCACAGACATATTTTTGGGACATAG 2397 0.4318 MGELYKISSIDWKPSPVLALATSVDGLRVAAARQDGSLEIWLVSPGSIGWHCQLTIHGDADKRVSSLVWCTGALNDEACGRLFSSHIDGSVTKWDLFHLKQTTVLDTDGVSIWKMAVTLPKRDVINSETKNNHVGNGFVSKFHDSDEHDENSESDEDSDSTDTMKQSVIEYPRVAIAYDDGCVRIYAISDTDDFMYVKSLPRVKGRVLSVTWSADANHIFSGSSDGLIRCWDVISGHEVYRITAGLGGLGSGHDLCIWSLLSLRSGALVSADSSGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPGHDRVFSAGSDGQVILYKLSSQSASSDGVNSPIMMKKWIYVQGVRAHTHDVWALTVAVPITQEDALPDERVKRARREEKPVEFSYHKWAHLGVPMLISAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPIQLVLNTAFNQSSMLLVQSSHGLDVHLLQLRNVHTAGGRAKTEMLARVKSKASQKIICSTISNSGTLFAYSDHLKPNLFELKRSEGGKVTWSVSKRKLPSRLPFAHSMIFTHDSSWLIVAGHDRRIYVVDVRSSELVHTFTPCRDLQDEKLPPTEPPITRLFSSSDKQWLAAVNCFGDIYVFNLEILRQHWFISRLDGASVTAGGFPPQNSNVMIITTSSNQVYAFDIEAKELGEWSKRHTYVLPRRYQEFPGEVIGLSFPPSSTSSSAVVYSSRAMCLIDFGLPVEQDDNDMLNIQDPRAKSSQNLSVKRKIKHKNFNVLPLENPVLFLAYMSKNSFFMIDKPWLEVVKSLEAPPVHRHIFGT* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0524 798 Gene3D - 3 135 IPR015943 GO:0005515
Lan3g0524 798 SUPERFAMILY WD40 repeat-like 11 115 IPR036322 GO:0005515
Lan3g0524 798 Gene3D - 170 255 IPR015943 GO:0005515
Lan3g0524 798 ProSiteProfiles Trp-Asp (WD) repeats profile. 291 332 IPR001680 GO:0005515
Lan3g0524 798 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 798 IPR044622 GO:0010073|GO:0035266
Lan3g0524 798 MobiDBLite consensus disorder prediction 135 163 - -
Lan3g0524 798 SUPERFAMILY WD40 repeat-like 173 668 IPR036322 GO:0005515
Lan3g0524 798 Gene3D - 256 683 IPR015943 GO:0005515
Lan3g0524 798 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 200 233 - -
Lan3g0524 798 SMART WD40_4 193 232 IPR001680 GO:0005515
Lan3g0524 798 SMART WD40_4 529 564 IPR001680 GO:0005515
Lan3g0524 798 SMART WD40_4 284 323 IPR001680 GO:0005515
Lan3g0524 798 SMART WD40_4 235 281 IPR001680 GO:0005515
Lan3g0524 798 SMART WD40_4 3 42 IPR001680 GO:0005515
Lan3g0524 798 SMART WD40_4 49 95 IPR001680 GO:0005515
Lan3g0524 798 Pfam WD domain, G-beta repeat 207 232 IPR001680 GO:0005515
Lan3g0524 798 ProSiteProfiles Trp-Asp (WD) repeats profile. 200 241 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0524 K14548 - gmx:100797494 1176.39