Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0702 ATGGGAAGAACTCCTTGTTGTGACAAAGCAAATGTTAAGAGAGGACCATGGTCTCCTGAAGAAGATGCAACACTCAAAAGTTATCTACACACTCATGGCACTGGTGGAAATTGGATTGCATTGCCTACAAAAGCTGGCCTTAGGAGATGTGGCAAGAGTTGTCGTCTAAGGTGGCTCAATTATCTAAGGCCAGATATCAAGCATGGTGGCTTTACTGAAGAAGAAGACAACATCATTTGCACCCTCTATGTGCAAATGGGAAGCAAATGGTCAGCTATAGCTTCTCAACTTCCAGGGAGAACAGATAATGATGTGAAAAACTATTGGAACACAAAACTAAAGAGGAAGCTTATTGCAGGAAAAGTTTGCCTCAAAAAATTGAATGATAATGACACTCTTCCTTCAACTCCATTACTAACCCAAAAGGCTCAAAATTTGGACTTTCTTGTTTCACAGAATCAAAATTCTATGCCAAACTTAAGCACAGATGCTTGTTCTGAATTTAACATTGATGAAAAAAACATGGGTTTTGGCCTAATTCATCAGTTCTATAGCCCACAGGTCAAAGAAGTTGGTGCAAGTTCAAGGAACAATAACCATAACCATAACCATAACCCATTGGTGTCATTGTCTCAAGAAGGTTCAAGCATTTCAGATTCATCTTCCATTGCAGTAGACAACAAATGTGTATTGCTGCCAGAACATGTTGGTGATCATGAATCTACAGAGCAAGTGTTGATGGATTTTGGGTTTGAATTTCCTTATGATCTTACCAATAATCTTAATTGCCATGAGAAATTTGGTGAATTATTTTCTCCAAGTGGGTATCCTGAGTGGGTTGATTTTAGCTATGTTGACATTAAGCCACATTTACTTAACCAAAATTAA 888 0.3818 MGRTPCCDKANVKRGPWSPEEDATLKSYLHTHGTGGNWIALPTKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEEEDNIICTLYVQMGSKWSAIASQLPGRTDNDVKNYWNTKLKRKLIAGKVCLKKLNDNDTLPSTPLLTQKAQNLDFLVSQNQNSMPNLSTDACSEFNIDEKNMGFGLIHQFYSPQVKEVGASSRNNNHNHNHNPLVSLSQEGSSISDSSSIAVDNKCVLLPEHVGDHESTEQVLMDFGFEFPYDLTNNLNCHEKFGELFSPSGYPEWVDFSYVDIKPHLLNQN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0702 295 Gene3D - 70 136 - -
Lal8g0702 295 CDD SANT 71 113 IPR001005 -
Lal8g0702 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lal8g0702 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lal8g0702 295 CDD SANT 16 62 IPR001005 -
Lal8g0702 295 Gene3D - 7 68 - -
Lal8g0702 295 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lal8g0702 295 PANTHER OS09G0431300 PROTEIN 1 216 - -
Lal8g0702 295 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lal8g0702 295 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lal8g0702 295 PANTHER OS09G0431300 PROTEIN 1 216 - -
Lal8g0702 295 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lal8g0702 295 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lal8g0702 295 SMART sant 13 64 IPR001005 -
Lal8g0702 295 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0702 Lal-Chr8 4987609 4989782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0702 1 118 MYB Transcription Factor Family AT3G49690 80.508 4.09e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal8g0702 Myb_DNA-binding 7.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0702 K09422 - gmx:100817747 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0702 8 4987609 4989782 Lal8g0702 8 4987609 4989782 ECH