Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0696 ATGGTGGACGCGTCCGTGCTTGGTTGGGTTCTATGTTCCGTGCTGAGCCTTTTCGCACTCTACAGTTTGGTTTTCGCAGGGAATAACTGTCCGAAGAATAAGGAGGCTCAGCGCTCGGAGAATGTGACAACCGCTGCCGGAGAACGGGGATCTGTGAAGGATAACGGCGAGGCTGACGTCATTATTGTCGGAGCTGGTGTTGCTGGCGCTGCTCTCGCTCATACTCTCGGCAAGGATGGACGACGAGTACATGTCATCGAAAGAGATCTGACTGAGCCTGACCGAATTGTTGGGGAGTTGCTACAACCTGGTGGCTATCTCAAATTAGTTGAGCTGGGGCTTGAAGCGCTTGAGAAAATTGTCCATTCAACTGCAGATTGCGTGGAGCAAATTGATGCTCAGAAAGTATTTGGTTATGCTCTTTTCAAGGATGGGAAACATACTCGTCTCTCGTATCCCTTGGAGAAGTTTCATGCAGATGTCTCCGGCAGAAGCTTTCACAATGGGCGTTTTATTCAGAGGATGCGGGAGAAGGCTTCCTCCCTTCCGAATGTAAAGTTGGAGCAAGGGTCAGTCACTTCTCTACTTGAAGAAAAGGGGATAATTAAAGGTGTGCAATACAAGAACAAAGACGGTCAGCAATTGACGGCATATGCTCCTCTTACCATTGTTTGTGATGGCTGTTTCTCAAACTTGCGCCGTTCTCTTTGTAATCCTAAGGTAGATGTTCCCTCTTGTTTCGTTGGCTTAATTTTAGAGAATTGTGAACTTCCATGTGCAAATCATGGCCATGTCATACTGGGAGATCCTTCACCTGTTCTGTTCTATCGTATAAGTAGTACAGAGATTCGCTGTCTGGTTGATGTACCTGGTCAGAAGGTTCCTTCTATTTCGAACGGTGAAATGGCAAAGTATTTGAAGACAGTGGTGGCTCCACAGATTCCCACTGAGCTTCGTGATGCCTTCATAGCTGCAGCGGACAAAGGCAACATAAGGACAATGCCAAACAGAAGCATGCCAGCAGATCCTCTCCCTACTCCTGGAGCACTTCTGATGGGAGATGCATTCAACATGCGACACCCTCTAACAGGGGGAGGAATGACTGTGGCATTGTCTGATATTGTGGTGTTAAGAAATCTTCTCAAGCCTTTGCGTGACTTGAATGATGCACCCACACTTTGCAAATACCTTGAATCTTTTTATACCTTGCGTAAGCCGGTGGCATCCACCATTAATACGTTGGCAGGAGCCCTTTACAAGGTTTTCTGTGCATCACCTGATCAGGCAAGGAAGGAAATGCGCCAAGCTTGTTTTGATTATCTGAGCCTCGGAGGCCTATTCTCGGAAGGACCCGTCTCTTTACTTTCAGGATTAAACCCTCGTCCCTTGAGTTTAGTTCTCCATTTCTTTGCCGTTGCAGTATATGGTGTAGGCCGCTTGCTATTACCATTTCCGTCACCTAAAAGAATATGGATTGGAGCCAGACTACTCTCTAGTGCATCTGGAATCATCTTTCCAATAATTAAGGCAGAAGGGGTTCGTCAGATGTTTTTCCCTGCAACTGTTCCTGCTTATTACAGAACTCCCCCACCTGCACATGAGTGA 1605 0.4698 MVDASVLGWVLCSVLSLFALYSLVFAGNNCPKNKEAQRSENVTTAAGERGSVKDNGEADVIIVGAGVAGAALAHTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLVELGLEALEKIVHSTADCVEQIDAQKVFGYALFKDGKHTRLSYPLEKFHADVSGRSFHNGRFIQRMREKASSLPNVKLEQGSVTSLLEEKGIIKGVQYKNKDGQQLTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLILENCELPCANHGHVILGDPSPVLFYRISSTEIRCLVDVPGQKVPSISNGEMAKYLKTVVAPQIPTELRDAFIAAADKGNIRTMPNRSMPADPLPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLSLVLHFFAVAVYGVGRLLLPFPSPKRIWIGARLLSSASGIIFPIIKAEGVRQMFFPATVPAYYRTPPPAHE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0696 534 SUPERFAMILY FAD/NAD(P)-binding domain 58 442 IPR036188 -
Lal8g0696 534 Pfam NAD(P)-binding Rossmann-like domain 62 88 - -
Lal8g0696 534 PANTHER SQUALENE MONOOXYGENASE 1 531 IPR040125 GO:0004506|GO:0016126
Lal8g0696 534 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 59 81 - -
Lal8g0696 534 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 218 233 - -
Lal8g0696 534 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 346 361 - -
Lal8g0696 534 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 361 377 - -
Lal8g0696 534 Pfam Squalene epoxidase 219 491 IPR013698 GO:0004506|GO:0016021|GO:0050660
Lal8g0696 534 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 531 - -
Lal8g0696 534 Gene3D - 50 422 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0696 Lal-Chr8 4938198 4942658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0696 32 534 Miscellaneous Gene Families AT1G58440 76.832 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0696 K00511 - gmx:100795522 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0696 8 4938198 4942658 Lal8g0696 8 4938198 4942658 ECH
Lal8g0696 8 4938198 4942658 Lal25g0615 25 4667197 4671443 LSH