Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0695 ATGGATTTTCAACATGGAAATGAGAGAGTTATGAAATGTCCTACATCATCTGGTTTGAGCACAAATGTTTCAGAAATGGGTATTAGTTCTGTGTCTATGGCTAAGCCTATTCTTCCTTCAGATCATGTAACTAATAATCCCTTTCTTGCTTCTTCTGCTTGGGATCCACTTGTTTCACTGAGTCAAGCTCAAACTTTTGGAGGCTCTTCAATGGTTTCTCATAGTGACTTTAGCAACAACTCATCTTACCCTCCTCTTGTTAACAGCACCTCTCACCTTGTTCAATACATGTCTGACTCAAATCTTGGGGACATGGTTCACAAGGTTCCCTCATATGGCAGTGGAAACTTCTCTGAAATTGTTGGCACTTTTGGTCAACATGGGTTTGGTGACATAGCTAACACTAATTCTGGGTATAGATCAAATTATAATGTGAGTAAGGATGCTGGAACTGAAAGGGCTTCAATAAATGGTGAACAATCTCAAGTTGAGGATTCAGCTACTGAAGAAGGAACCCCAGGATCTGGTCCTAGTGCAAATAGAAGAAAGAGAAGTCTTGATCATAATTCTTCTTTCAGTCCAAATAAGAATGCTGAGGGTGATGCACTGAAAATTTCTCCTGGGAAGAGCTTTGATGGTGCAAAAGAACATGAAAAGAAACAAAAACTTGAGCAGAATAGTAATGCAGATTTGCGCGGTAAGCAACCGGTGAAGCAAGCTAAAGATAATTCTCTAAGTGAAGAAGCTTCTAAAGACACTTTCATTCATGTGAGAGCTCGAAGAGGTCAAGCCACAAATAGCCATAGCCTTGCAGAAAGGGTGAGAAGAGAAAAGATTAGCGAGCGAATGAGGTTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACCGGCAAAGCAGTTATGCTGGATGAAATTATAAACTATGTGCAATCACTGCAGAAACAGGTTGAGTTCTTGTCCATGAAACTTGCCACAGTAAACCCAGAACTGAATTTTGATATGGAGAGGATCCTATCCAAAGATATTCTTCAGTCGCGCATAGGACATGGAATTGGTGGATATGGTCCTGGTATAAGCTCTTCTCACCCATTTCCCAATGAAAGTTTCCAAGGAACTATGACTGGCATGCCTAGTACATCAACACAATTCCCTCCTTTGCCTCAGAGTGTTTTGGATCACGAGTTCCAAAGCTTCTATGGGATGGGATATGATTCTGGTACAGCACTCGAAAATTCGGGACCAAATGGGCGGTTGAAAACGGAGTTATAG 1272 0.4119 MDFQHGNERVMKCPTSSGLSTNVSEMGISSVSMAKPILPSDHVTNNPFLASSAWDPLVSLSQAQTFGGSSMVSHSDFSNNSSYPPLVNSTSHLVQYMSDSNLGDMVHKVPSYGSGNFSEIVGTFGQHGFGDIANTNSGYRSNYNVSKDAGTERASINGEQSQVEDSATEEGTPGSGPSANRRKRSLDHNSSFSPNKNAEGDALKISPGKSFDGAKEHEKKQKLEQNSNADLRGKQPVKQAKDNSLSEEASKDTFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQKQVEFLSMKLATVNPELNFDMERILSKDILQSRIGHGIGGYGPGISSSHPFPNESFQGTMTGMPSTSTQFPPLPQSVLDHEFQSFYGMGYDSGTALENSGPNGRLKTEL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0695 423 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 263 313 IPR011598 GO:0046983
Lal8g0695 423 Gene3D - 260 335 IPR036638 GO:0046983
Lal8g0695 423 MobiDBLite consensus disorder prediction 150 251 - -
Lal8g0695 423 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 7 423 - -
Lal8g0695 423 CDD bHLH_AtBPE_like 254 338 - -
Lal8g0695 423 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 331 IPR036638 GO:0046983
Lal8g0695 423 MobiDBLite consensus disorder prediction 228 243 - -
Lal8g0695 423 MobiDBLite consensus disorder prediction 150 179 - -
Lal8g0695 423 SMART finulus 269 319 IPR011598 GO:0046983
Lal8g0695 423 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 7 423 IPR024097 GO:0006355
Lal8g0695 423 Pfam Helix-loop-helix DNA-binding domain 266 314 IPR011598 GO:0046983
Lal8g0695 423 MobiDBLite consensus disorder prediction 210 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0695 Lal-Chr8 4924096 4928142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0695 1 423 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 39.767 2.83e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal8g0695 HLH 4.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0695 - - gmx:100794464 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0695 8 4924096 4928142 Lal25g0614 25 4653835 4657318 LSH
Lal8g0695 8 4924096 4928142 Lal10g0759 10 15276079 15280704 LSH