Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0690 ATGGATCTTGGGGTGGTTGGTTTTGATGGGTTGGTGGGTTCAAACACTACTTCTACTCCTACAAGTGATGGCTTTGTTTCTCTTGCTTTAGATCCTGAAACAAAGTACAAAGTGTATGGATCTGGTGGGTTTCTTAAGCAAGAGAGATCTAGCACTATTACTGATGAAGATGAATGGAGGAGTTCTAAACTTGCTAAGACTCATGGTGACTTATTTGCTTCTTCTTCTTCCAAAGCAATGTTGCTCCAAGAAAGAGACTCTTTGTTGAGATCTAATAATAGTGCCACTCTCTTTTGTGATGGTCAACAAATGCTGAGTTTTTCTTCTCCTAAATCAGAAACTTCCTCAACATTGCATTTTTCTTACCACCCTTATAGCAGAGATACAGGTTATAGTTCAGGAAGCATGCATGGGGCTATAACAGGGACCAGAGGGTTATTCACTCCTTCTCAGTGGATGGAGTTGGAACATCAAGCCTTGATCTATAAGTACATAACAGCAAATGTGCCAGTTCCTTCCCATCTTCTCTTCCCAATCAGAAAAGCACTTGATTCTGCTGGCTTCTGTAACTTTTCAAATGGTGTTTTTAGACCCAATGCATTGGGATGGGGAGCTTTCCATCTTGGATTCTCAAACAGCACCGATCCTGAGCCAGGAAGGTGTCGTAGAACGGATGGGAAGAAATGGCGGTGCTCTAGAGATGCTGCTGTGGACCAAAAGTATTGTGAGCGCCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAACAAGGCCATTTAGGCCATGCTGGTATCGCGACCGCAACCACAACCATTACAACTACTACTCCAAATGCCACTACTAATAACAACAATGGTTGTTCCTCGTCACTGTCTAGTTTGATGCCCGGTAACTGTGCATCCGATAACCTTAGCATCGTGCCGCAACAGGAACATAAGAATATGCAGCATCCTCTGGCATCTGATACTTCTCCAGCTAGCAGCATCAACAGGATTTTTATGAATAACAACAAAGAGATTAATGCAAGTGAGAGAATGCAAGATAACCCTTCCCTTCCTATGCTGCCTTCTACTCTAGAGCTGAAACCAAAGGAAAACATCCCTTTTATGATTCATAAACACCAAATCCGATCATACGAAGAATCCACAAGGAATGATAACGAGTTTGGGCTTGTCACTTCTGATTCCCTACTCAACCCTTCTCAGAAAAACTCCACCTTTAGTCCTTCATTGCAAAACCAAGATACCGAACCGCAACATTCCCTTAGGCATTTCATTGATGACTGTCCCAATGATGACATGCAATCAGATCAAACACAACTATCAATTTCAATCCCAATGGCTGCTTCCTCAGAATTCATGTCATTCTCTTCTTCAACCACTAATGAAAAGCTCACATTGTCACCTTTAAGGTTATCAAGGGAGTTAGATCCAATTCAAATGTGTTTGGGTGTGGGAAGTGGTATCAATGAATCAAATACAAGGCAAGCTAATTGGGTTCCAATTACTTGGGAGAGTTGTTCTATGGGTGGTCCTCTTGGAGAGGTTCTGAATCTTAGTAATAACAACAACAATGTAAGTGAGCATTGTTCAAGAAACTCTTCTGCTCTAAACCTTATGACTGAAGGGTGGGACAATAGTCCTCCAATAGGGTCATCATCTCCTACAGGGATTTTGCAGAAAACAGCATTTGGATCACTTTCCAATAGCAGTGCTGGAAGCAGTCCAAGAGCATATAATAACAAGACTCAAGAAGGTGCAAACTTTTGCAATGACCTACTTGGATCAACCATGAAACCCATATTGTAA 1815 0.4215 MDLGVVGFDGLVGSNTTSTPTSDGFVSLALDPETKYKVYGSGGFLKQERSSTITDEDEWRSSKLAKTHGDLFASSSSKAMLLQERDSLLRSNNSATLFCDGQQMLSFSSPKSETSSTLHFSYHPYSRDTGYSSGSMHGAITGTRGLFTPSQWMELEHQALIYKYITANVPVPSHLLFPIRKALDSAGFCNFSNGVFRPNALGWGAFHLGFSNSTDPEPGRCRRTDGKKWRCSRDAAVDQKYCERHMNRGRHRSRKPVEQGHLGHAGIATATTTITTTTPNATTNNNNGCSSSLSSLMPGNCASDNLSIVPQQEHKNMQHPLASDTSPASSINRIFMNNNKEINASERMQDNPSLPMLPSTLELKPKENIPFMIHKHQIRSYEESTRNDNEFGLVTSDSLLNPSQKNSTFSPSLQNQDTEPQHSLRHFIDDCPNDDMQSDQTQLSISIPMAASSEFMSFSSSTTNEKLTLSPLRLSRELDPIQMCLGVGSGINESNTRQANWVPITWESCSMGGPLGEVLNLSNNNNNVSEHCSRNSSALNLMTEGWDNSPPIGSSSPTGILQKTAFGSLSNSSAGSSPRAYNNKTQEGANFCNDLLGSTMKPIL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0690 604 ProSiteProfiles QLQ domain profile. 146 181 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal8g0690 604 Pfam QLQ 147 180 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal8g0690 604 ProSiteProfiles WRC domain profile. 215 259 IPR014977 -
Lal8g0690 604 MobiDBLite consensus disorder prediction 249 287 - -
Lal8g0690 604 MobiDBLite consensus disorder prediction 266 287 - -
Lal8g0690 604 SMART QLQ_2 145 181 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal8g0690 604 MobiDBLite consensus disorder prediction 397 419 - -
Lal8g0690 604 Pfam WRC 216 258 IPR014977 -
Lal8g0690 604 PANTHER - 31 585 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal8g0690 604 PANTHER GROWTH-REGULATING FACTOR 9 31 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0690 Lal-Chr8 4863659 4867556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0690 1 567 GRF Transcription Factor Family AT2G22840 40.545 1.59e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lal8g0690 WRC 2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0690 - - gmx:100818860 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0690 8 4863659 4867556 Lal8g0690 8 4863659 4867556 ECH
Lal8g0690 8 4863659 4867556 Lal10g0763 10 15341961 15346572 LSH