Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0689 ATGGAGAAGATCTGCGTCGCTGTTCGAGTTCGCCCTTCAACTTCCGAAGATTCCTTCAATGGAAGCTTCTGGAAGGTCGAAGAGAACCGTATCACTCTTCACAGAACTCATGACACTCCTCTCTCCGGTTCATCTTATGCTTTTGATCATATATTTGATGAAAGTAGCACAAATGCTAGTGTATATAACCTCCTCACTAAGGATATCATTCATGCCGCGCTCGACGGATTTAATGGAACTGCATTTGCTTATGGGCAGACCAGTAGTGGCAAGACCTTCACCATGAATGGTTCTGAAACTGATCCAGGAGTAATTCCTCGAGCTGTTAAAGATTTGTTTGAAAAAATGGAGAGGATGTCTGATCGAGAGTTTCTGATTCGAGTTTCGTACATGGAGATCTATAATGAAGAAATTAATGATCTTCTCACTGTTGAAAATCAGAAACTTCAAATTCATGAGAGTTTGGAGCGTGGAGTATTTGTTGCAGGGCTCCGAGAGGAAGTTGTCAATAATGCTGAACAGGTCTTAAATCTCATTAATGCGGGGGAAGTTAACAGACACTTTGGTGAGACGAACATGAATGTTAGGAGTAGCAGATCACATACAATATTTAGAATGGTGATTGAAAGCAAAGGGAAGGACTCAAATTCTTCTAGTGATTGTTCAATTAGTGATGTTGTTCGAGTTTCAGTCTTGAATTTAGTAGATTTAGCTGGTTCTGAAAGAATTGCTAAGACTGGAGCTGACGGAGTACGATTAAAAGAAGGAAAAAGTATTAACAAGAGCTTGATGATTTTAGGAAATGTTATTAACAAACTTAGTGATGGTTCAAAGCAAAGAGGGCATATCCCTTATCGTGATAGTAAATTAACCCGTATACTCCAACCTGCTCTTGGTGGTAATGCCAAAACATCCATTATTTGTACCATAGCACCAGAAGAGATTCATATTGAAGAAACAAGGGGAACTCTTCAGTTTGCTAGTAGAGCCAAACGCATCACAAACTGTGTTCAAGTGAATGAGGTCCGTATTTTGACAGATGCAGCCTTGTTAAAGCGGCAACAATTAGAGATAGAGGAGCTACGCAAGAAATTTCAGGGATCCCATGCTGAGGTGCTCGAGCAAGAGGTTCTTAAACTCAGAAATGATTTGCTCAAGGCAGAGTTAGCATTGAGTTATTATATTCACGCTAAATATGAATTGGAGCGTGGGAAGCTTGAAACAGAACTGAAGGAGGAGAGGAAGTCACGTGATCAATGGATTCAAGAGCAACGGATGAAATTTGAAAATTCCAGTTCTATAACTTTCTCAGACTGTGAGACAAATGACAGTCAGGGACAAGGGTCTTTGAGGCACAGATTCACGGAAGAGTGCAATGACATTAATAGTACATCTCAAGGAGATATTTTTAAATCTCCCTGTTTAAAGACAGCTCCCAATGCTTTTGTTGCCAGGCGACCAAAGTATACAACATTGCCAGATTGTAGCCCTCCTCCAGATGCTTTCAGCAATGTGGCTGATGAGGATATGTGGATGAAAATGAACAATGGTTATGTTGCAGATCTTGATTCACTTCAAACTACTCCCATTCAAAAATTTCAGTCCTTCCTGACAAGTGATACTACTCCTGTGACTGGTCGTTTAAATGAAATTGAAAAGTATGAGCGGGAGGCTCAAGAGTTGAGGATGCAGCTGGAACTTGCTAATACAAAAATAAATGAACTAGAGAGAAAGCATGCAGATGAAGTAACATTGAACAAACAATTAATGGGTGAGACACCTGAACACCAACAAGGAACACAAATAATTCAAGAATTGCCTCTTAGGTTATCGGAATCTGTGGAGAACTTCGAAGACAGCTTTGAGGAGGTTTTGTCAGCAATGCAGAGGTTTGCATCTGTTGGTAAATTATCTACAACAAAGGTGCTTTCAACCATAAGTGAAATTGGTACACAGCTATTTGCAACATTGGAAGCTAACTTTACCATGAATAGGGATAATGAAAAGTCTTCCTCTGGGAATTATGCTTTAATGCATGAACAACAAAAAGTGTTTCATGAGAGGATGAATAATATAATTACATCACTTGAGCTATCAGACTGCTCAACAGTAGAATGGCAGGAAAGGAGTCCATTGTGCAGCTGTGAACACAAGGGCTCTGTTTTGGGAGGAGAAAATGCTTACTCAAAGGAGGTTTTGAATGAAAGATATGAAAGCCTGGAAAAGGAGTTCCTACTTTTGAAGGAAGAAAGAGACTCTCTGCTTCAGATGTTCACTGAGTCATCAGAGAAACTAGCAATGGTTACAAGCCAAAATGAAAATACTCTGAAAGATTTAAATACTGAAGTACAGAGAAGGAAAAATCTAGAAGGGGAGATTAAGCAGTTTTATGCAGCTTTTGCCCTTCGTCAGAAATCACACATGTCTTTCCATAGTGAATGTAAGACCGTAATTGAGAAATTGAGAGCCCACACTCCAATATCAGTGCCTAAATCTTTTGATTGTCAAGACTAG 2514 0.3966 MEKICVAVRVRPSTSEDSFNGSFWKVEENRITLHRTHDTPLSGSSYAFDHIFDESSTNASVYNLLTKDIIHAALDGFNGTAFAYGQTSSGKTFTMNGSETDPGVIPRAVKDLFEKMERMSDREFLIRVSYMEIYNEEINDLLTVENQKLQIHESLERGVFVAGLREEVVNNAEQVLNLINAGEVNRHFGETNMNVRSSRSHTIFRMVIESKGKDSNSSSDCSISDVVRVSVLNLVDLAGSERIAKTGADGVRLKEGKSINKSLMILGNVINKLSDGSKQRGHIPYRDSKLTRILQPALGGNAKTSIICTIAPEEIHIEETRGTLQFASRAKRITNCVQVNEVRILTDAALLKRQQLEIEELRKKFQGSHAEVLEQEVLKLRNDLLKAELALSYYIHAKYELERGKLETELKEERKSRDQWIQEQRMKFENSSSITFSDCETNDSQGQGSLRHRFTEECNDINSTSQGDIFKSPCLKTAPNAFVARRPKYTTLPDCSPPPDAFSNVADEDMWMKMNNGYVADLDSLQTTPIQKFQSFLTSDTTPVTGRLNEIEKYEREAQELRMQLELANTKINELERKHADEVTLNKQLMGETPEHQQGTQIIQELPLRLSESVENFEDSFEEVLSAMQRFASVGKLSTTKVLSTISEIGTQLFATLEANFTMNRDNEKSSSGNYALMHEQQKVFHERMNNIITSLELSDCSTVEWQERSPLCSCEHKGSVLGGENAYSKEVLNERYESLEKEFLLLKEERDSLLQMFTESSEKLAMVTSQNENTLKDLNTEVQRRKNLEGEIKQFYAAFALRQKSHMSFHSECKTVIEKLRAHTPISVPKSFDCQD 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0689 837 Gene3D Kinesin motor domain 1 367 IPR036961 -
Lal8g0689 837 ProSitePatterns Kinesin motor domain signature. 230 241 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal8g0689 837 PRINTS Kinesin heavy chain signature 76 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0689 837 PRINTS Kinesin heavy chain signature 191 208 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0689 837 PRINTS Kinesin heavy chain signature 231 249 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0689 837 PRINTS Kinesin heavy chain signature 283 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0689 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 366 IPR027417 -
Lal8g0689 837 SMART kinesin_4 1 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0689 837 Coils Coil 730 757 - -
Lal8g0689 837 Coils Coil 544 578 - -
Lal8g0689 837 Coils Coil 396 423 - -
Lal8g0689 837 ProSiteProfiles Kinesin motor domain profile. 3 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0689 837 CDD KISc_CENP_E 3 333 - -
Lal8g0689 837 Pfam Kinesin motor domain 9 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0689 837 PANTHER CENTROMERE PROTEIN E 2 808 - -
Lal8g0689 837 Coils Coil 351 390 - -
Lal8g0689 837 PANTHER CENTROMERE PROTEIN E 2 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0689 Lal-Chr8 4855408 4862933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0689 2 391 Miscellaneous Gene Families AT2G21380 43.939 1.22e-90 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0689 K11498 - gmx:100804944 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0689 8 4855408 4862933 Lal8g0689 8 4855408 4862933 ECH
Lal8g0689 8 4855408 4862933 Lal10g0765 10 15365297 15371085 LSH