Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0688 ATGTTTTTCCACGATGAAACGGTCCAGTTCTCATGTTCAACGGTTCTCGAAACCATGCTCACACCGGGTGACAAAGAAGAGTTGTTGTCCCTCATTCACCAATCAAGAGACCAAGTGAGCCTAAACTCCGGTTCACAAGGGTCGAACCGGACGGTTTACTCTACACAAGAAAGAAAGACGAGGCGCATGGAGTCGAACCGGGAGTCTGCCAGGCGGTCCAGATGGAGAAAGAAGAGGCATGCAGAGAATATCAAGAACCAAGTGAACCGGTTGAGAACCGAAAACAGAGAACTTAAAAACCGGCTCGGCTTGACCATGCACCACCATCTACTACTATCACTAGAGAATGAGAATCTAATATCCGAATCCATGGTCCTTATAGCAAAACTTACGGATCTAATTGGGATTTTAAACACCATGCTTTCACAATAG 432 0.4606 MFFHDETVQFSCSTVLETMLTPGDKEELLSLIHQSRDQVSLNSGSQGSNRTVYSTQERKTRRMESNRESARRSRWRKKRHAENIKNQVNRLRTENRELKNRLGLTMHHHLLLSLENENLISESMVLIAKLTDLIGILNTMLSQ 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0688 143 PANTHER BZIP TRANSCRIPTION FACTOR 20 142 - -
Lal8g0688 143 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 61 76 IPR004827 GO:0003700|GO:0006355
Lal8g0688 143 MobiDBLite consensus disorder prediction 55 71 - -
Lal8g0688 143 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 56 102 IPR004827 GO:0003700|GO:0006355
Lal8g0688 143 MobiDBLite consensus disorder prediction 39 78 - -
Lal8g0688 143 PANTHER BZIP TRANSCRIPTION FACTOR 44 20 142 - -
Lal8g0688 143 Gene3D - 56 109 - -
Lal8g0688 143 Coils Coil 77 101 - -
Lal8g0688 143 Pfam bZIP transcription factor 57 103 IPR004827 GO:0003700|GO:0006355
Lal8g0688 143 SUPERFAMILY Leucine zipper domain 58 112 IPR046347 GO:0003700|GO:0006355
Lal8g0688 143 MobiDBLite consensus disorder prediction 39 54 - -
Lal8g0688 143 CDD bZIP_plant_GBF1 59 109 IPR045314 GO:0003700|GO:0006355
Lal8g0688 143 SMART brlzneu 54 118 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0688 Lal-Chr8 4850507 4850938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0688 49 137 bZIP Transcription Factor Family AT2G22850 47.778 3.18e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal8g0688 bZIP_1 8.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0688 - - gmx:102661984 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0688 8 4850507 4850938 Lal10g0766 10 15376552 15376983 LSH
Lal8g0688 8 4850507 4850938 Lal4g0155 4 966562 966999 PCT
Lal4g0155 4 966562 966999 Lal8g0688 8 4850507 4850938 PCT