Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0685 ATGGGTGAGCTTTTCAAAATAAGCTCAATCGATTGGAAACCCTCACCTGTCATAGCCTTAGCCACTAGTGTCGACGGTTTGCGTGTAGCCGCAGCACGCCAAGATGGTTCGCTTGAACTCTGGTTAGTCTCTCCTGGTTCAATCGGTTGGCACTGTCAGTTAACTATTCAAGGAGATCCTCATAAACGAGTTTCTTCTCTTATTTGGTGCCATGATAGCTTAAACGATGATAACAGTTCTGGTCGTTTGTTTTCATCTAATTTTGATGGTTCCGTTTCTAAGTGGGATCTTTTCCATTTGAAGCAAATGACAGTGCTAGAGTCAGATGGTGTCTCAATCTGGAAAATGGCTCTGACGCTGCCTATACCTAAGAGCGACGAACAGAATTCCGAAACAAAGGGCCTTATTGTTGGGAATGGATTTGTGGGTAAAGTTAACCATTCATATGAACATGACGAGAACAGTGAGAGTGACGAAGATTCTGACTCACCTGATACTCTCAAGCAAACTGTGATTGAGTATCCACGTGTAGCAATAGGTTATGATGATGGATGTGTGAGAATTTATGCCATCTCTAATACGGATGAATTTATGTATGTAAAATCATTGCCTCGGGTCAAAGGACGGGTTTTAAGTGTAACTTGGAGTACAGATGCTAGCCATGTATATTCTGGTAGTAGTGATGGGCTAATACGATGCTGGGATGTCATATCAGGTCACGAAGTCTATAGGATTACAGCTGGACTTGGAGGTTTGGGTAGTGGACATGATCTTTGTATACTGTCATTGCTGTCTTTAAGGTCTGGGACACTTGTTAGTGCAGACAGCACTGGTAGTGTCCAGTTCTGGGACAGCCAACATGGAACTCTCTTGCAAGCACATTCATTACACAAGGGAGATGTAAATGCTCTGGCAGCAGCTCCCAGTCATGATAGAGTGTTCTCTGCGGGTTCTGATGGTCAGGTTATTCTTTATAAGCTCTCTAGTCAGCTAGTGTCATCTGGTGGCATCAATTCTCCGATATTGATGAAGAGATGGATCTATGTTCAAAATGTTAGGGCTCATACGCATGATGTTAGGGCATTGACTGTTGCTGTACCAATAACTCAAGAAGCTATGCTATTCTGTTCAGCAGATCCTTTGCCAGATGAGAGGGTTAAAAGAGCTCGGCGTGACGAAAAGCCCATTGAGTTTAGTTACCATAAGTGGGCTCATTTGGGAGTTCCCATGCTTGTCTCAGCAGGAGATGACACTAAGCTCTTTGCATACCCTGTGAAAGAATTTACGAAGTTTTCTCCCCATGATATCTGTCCTGCACCTCAGAGAACGCCTATTCAACTAGTGCTTAATACTGCCATCAGCCAATCGTCAATGATTTTGGTCCAATCTTCACATGGTTTAGATATTCATTTGCTACAACTCAGAAATGTTCACACAGCAGGAGGCCATGCAAAGACTGAATTGCTTGCCCGAGTCAAAAGTAAAGCATCTCAAAAGATTATTTGCAGCACCATTTCAAATTCTGGGATGCTTTTTGCGTACTCTGATCATTTGAAGCCTAGTCTCTTCGAGTTGAGGAGGTCTGAAGGTGGGAAAGTTACATGGAGTGTTAGTAAAAGGAAACTTCCTCTGAGATTACCGTTTGCCCATTCTATGATTTTTACTCATGATTCCTCTTGGTTGATACTTGCTGGGCATGATAGAAGAATATATGTTGTGGATGTGGGAAGCTCAGAACTAGTGCACACTTTTACACCGTGCCGTGACTTGCAAGATGAAAAACTACCTCCAACTGAGCCTCCAATTACAAAATTGTTTAGCAGTTCTGATAGGCAGTGGTTGGCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAACTTGGAGATACTAAGGCAACACTGGTTCATTTCACGACTAGATGGTGCTTCTGTTACTGCTGGTGGATTTCCGCCCCAGAACAGCAATGTAATGATAGTTACAACTTCCTCAAATCATGTGTATGCATTTGACATAGAGGCCAAGGAGTTGGGAGAATGGTCGAAACGACACACATATGTTCTTCCCAGGAGATACCAGGAATTTCCTGGTGAAGTTATTGGGCTTTCATTCCCTCCATCGTTGACTTCATCTTCAGTTGTTGTTTATAGCTCCAGGGCAATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGATGATAATGATATGGTAAATATTCAAGATCCAAGGGTCAAGAATTTACAAAATCTTAGTGTTAAGAAGAAGATTAGATATAAGAACTTTAATGTTTTGCCTTTTGAGAATCCTGTTTTATTTTTAGCCTACATGTCAAAAAATTCATTCTTTATGATAGACAAACCTTGGTTGGAAGTTGTCAAAAGTTTAGAAGCCCCACCGATCCACAGACATATTTTTGGCGCATAA 2427 0.4199 MGELFKISSIDWKPSPVIALATSVDGLRVAAARQDGSLELWLVSPGSIGWHCQLTIQGDPHKRVSSLIWCHDSLNDDNSSGRLFSSNFDGSVSKWDLFHLKQMTVLESDGVSIWKMALTLPIPKSDEQNSETKGLIVGNGFVGKVNHSYEHDENSESDEDSDSPDTLKQTVIEYPRVAIGYDDGCVRIYAISNTDEFMYVKSLPRVKGRVLSVTWSTDASHVYSGSSDGLIRCWDVISGHEVYRITAGLGGLGSGHDLCILSLLSLRSGTLVSADSTGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPSHDRVFSAGSDGQVILYKLSSQLVSSGGINSPILMKRWIYVQNVRAHTHDVRALTVAVPITQEAMLFCSADPLPDERVKRARRDEKPIEFSYHKWAHLGVPMLVSAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPIQLVLNTAISQSSMILVQSSHGLDIHLLQLRNVHTAGGHAKTELLARVKSKASQKIICSTISNSGMLFAYSDHLKPSLFELRRSEGGKVTWSVSKRKLPLRLPFAHSMIFTHDSSWLILAGHDRRIYVVDVGSSELVHTFTPCRDLQDEKLPPTEPPITKLFSSSDRQWLAAVNCFGDIYVFNLEILRQHWFISRLDGASVTAGGFPPQNSNVMIVTTSSNHVYAFDIEAKELGEWSKRHTYVLPRRYQEFPGEVIGLSFPPSLTSSSVVVYSSRAMCLIDFGLPVEQDDNDMVNIQDPRVKNLQNLSVKKKIRYKNFNVLPFENPVLFLAYMSKNSFFMIDKPWLEVVKSLEAPPIHRHIFGA 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0685 808 Gene3D - 163 255 IPR015943 GO:0005515
Lal8g0685 808 ProSiteProfiles Trp-Asp (WD) repeats profile. 203 244 IPR001680 GO:0005515
Lal8g0685 808 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 268 677 IPR011047 -
Lal8g0685 808 Pfam WD domain, G-beta repeat 210 235 IPR001680 GO:0005515
Lal8g0685 808 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 203 236 - -
Lal8g0685 808 SMART WD40_4 3 42 IPR001680 GO:0005515
Lal8g0685 808 SMART WD40_4 196 235 IPR001680 GO:0005515
Lal8g0685 808 SMART WD40_4 539 574 IPR001680 GO:0005515
Lal8g0685 808 SMART WD40_4 49 96 IPR001680 GO:0005515
Lal8g0685 808 SMART WD40_4 287 326 IPR001680 GO:0005515
Lal8g0685 808 SMART WD40_4 238 284 IPR001680 GO:0005515
Lal8g0685 808 Gene3D - 4 141 IPR015943 GO:0005515
Lal8g0685 808 SUPERFAMILY WD40 repeat-like 9 330 IPR036322 GO:0005515
Lal8g0685 808 Gene3D - 256 688 IPR015943 GO:0005515
Lal8g0685 808 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 807 IPR044622 GO:0010073|GO:0035266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0685 Lal-Chr8 4824043 4830298 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0685 K14548 - gmx:100797494 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0685 8 4824043 4830298 Lal8g0685 8 4824043 4830298 ECH
Lal8g0685 8 4824043 4830298 Lal10g0769 10 15423955 15431364 LSH