Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0694 ATGCTTGTTTATGTGTCATCATCACCATTGCAACTAAATTGGCTTTTTGGGTTGCTTGGTTTGGCAGAAAAGAAAGCAACAATTTCTGATGATAGCAGCAACATTAATCACCCTTGCCTCATTTTGCTGTTGATACTCTTGACAATCCTTATTGGTATTGGGTTGTACTTTAATCACCTGGCAGAATACAATAACAATAGCAGTGAGGATCATGAAGTTGATCAAAGCTTGAAAGAAGGGGAGCATGAGCACCCAGGTGGTGAATTAGACCATTATTTTGATGGTGGTCAGCAGCTCAGTCACCCGACCGCCACGCGCCGCGGTTTTGTCAGGAGATACGGTGCTTGTACCTTCTGTGGCAATCTAAGCAGCAGAAGGTGCTCACGCTGCAAGGTTGCTAGATATTGCTCAGTGGAATGCCAAATAAGGCATTGGAGGTCAGGGCATAAACATGAATGCTTTGAAACAGAGACTAAAGCAGATGAAGCAAAGCCTATTCATGCCAACAAGTCTGAAGGGGAGACTACCTCTAATGAAGTGAAATTGGGTTCAGATATGGGAGAAGTAGATGTGTCCAGTGACAGTGATTTCAACAACTTGCATTGCAGCTGTGAAGTTTGTGGCAGCCCAAGTACCACTAGATGCACAATATGCAAAACAGTCACATACTGGCTAGTCTCACTACCTTCTTTTTTTAATAATTTTTTGAGTTTCGTCTCAACAAAGTGCTTGATTGAGGACTGGAAATGGCATAAAGTTAACTGCACTGCAGGAGAAGTGAATTTAACTCCAACAGAAAATTTTCATGGAGATGTTGGAGTGCTCAAGAATTCACGCGAAGAGGAAGAGAATGTTCATTCATCTGAAGGAACCACAGACTTCAAGTCTCCAATTAAAGAATCAAAGGATCCTACCATAGAAGCCCAGGAACATGGAATTACAAAGATGGGGCAAAGTGAGGACGAAGCAACAAAGTATTGGAATCGGATTTTATTGCTACAATCAGAGCGTGATGATTGGATTAAGCGAGCTAATTTTGCTAGAGAAAGATTTCACAGCCTCAAGAAAGAGTCTGAACACCGGTTATTTGTGTTGAAGAGTGAAAAGGAATCAATATCAAATGCTGAGAAGAAGGCTAGCAATATGGTTCATAATTTACATGAGAGGCTACACAATTTGCAGGTTGCAGTGCAAAAATGCATGTCAGAGAAAAGAAAGCTAGAAGAGCATCTACAAATGGTAAAGAGTGATTGGGATAAGGCGAATAATGAACTGCAAAAAGAGAAGAAACACGTTCAATGTTTAACGGTGGAGTATGACAAGAGTTGTGAGACTGCACAGATTGCAAAAATAGCAGTTGAAGTGGTAAGACAAGAGCTTCAAGAGGAGAATGAACGTGTCCAACGACTTACAGATAATGTTAGAATTGCGGAATCTAGAGCTTCTTTTGCTGAGGCAAAACTCCGTGATCTTCATAGAAAAATCAGATCGAAAGATTATAAGGCATGCGCTATATGCCTTACCAAGGAAAAGGACTTGGCCTTTGGATGTGGGCACATGACTTGCAGAGACTGTGGAACAAAATTATCTAAGTGTCCTATATGCCGCGAGCAAATCACAAGCCATATCAAGCTGTTTCCTTGA 1644 0.413 MLVYVSSSPLQLNWLFGLLGLAEKKATISDDSSNINHPCLILLLILLTILIGIGLYFNHLAEYNNNSSEDHEVDQSLKEGEHEHPGGELDHYFDGGQQLSHPTATRRGFVRRYGACTFCGNLSSRRCSRCKVARYCSVECQIRHWRSGHKHECFETETKADEAKPIHANKSEGETTSNEVKLGSDMGEVDVSSDSDFNNLHCSCEVCGSPSTTRCTICKTVTYWLVSLPSFFNNFLSFVSTKCLIEDWKWHKVNCTAGEVNLTPTENFHGDVGVLKNSREEEENVHSSEGTTDFKSPIKESKDPTIEAQEHGITKMGQSEDEATKYWNRILLLQSERDDWIKRANFARERFHSLKKESEHRLFVLKSEKESISNAEKKASNMVHNLHERLHNLQVAVQKCMSEKRKLEEHLQMVKSDWDKANNELQKEKKHVQCLTVEYDKSCETAQIAKIAVEVVRQELQEENERVQRLTDNVRIAESRASFAEAKLRDLHRKIRSKDYKACAICLTKEKDLAFGCGHMTCRDCGTKLSKCPICREQITSHIKLFP 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0694 547 SUPERFAMILY HIT/MYND zinc finger-like 111 154 - -
Lal2g0694 547 ProSitePatterns Zinc finger MYND-type signature. 116 153 IPR002893 -
Lal2g0694 547 SMART ring_2 503 535 IPR001841 -
Lal2g0694 547 ProSiteProfiles Zinc finger RING-type profile. 503 536 IPR001841 -
Lal2g0694 547 PANTHER COPINE FAMILY PROTEIN 1 20 546 - -
Lal2g0694 547 Pfam Prokaryotic RING finger family 4 503 542 - -
Lal2g0694 547 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 487 547 IPR013083 -
Lal2g0694 547 SUPERFAMILY RING/U-box 502 542 - -
Lal2g0694 547 Gene3D - 108 159 - -
Lal2g0694 547 Gene3D - 195 257 - -
Lal2g0694 547 PANTHER PROTEIN, PUTATIVE-RELATED 20 546 - -
Lal2g0694 547 Coils Coil 446 494 - -
Lal2g0694 547 MobiDBLite consensus disorder prediction 279 305 - -
Lal2g0694 547 ProSiteProfiles Zinc finger MYND-type profile. 116 153 IPR002893 -
Lal2g0694 547 Pfam MYND finger 116 153 IPR002893 -
Lal2g0694 547 Coils Coil 390 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0694 Lal-Chr2 4233988 4239681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0694 92 153 Miscellaneous Gene Families AT4G31670 46.269 8.91e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0694 - K09291 lang:109351998 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0694 2 4233988 4239681 Lal2g0694 2 4233988 4239681 ECH