Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0618 ATGCAATCAAGGGTTTTGCATTTAGAAGAAGGAAAAGAAAGAATGAACCAAACCAAAGGCTTGCCTCTAAGGTTACTGAGGCTGTTTATGATGTTTATTGCTGTATGTGTTGTGTTCTCAATAATCAGCATGTATACCATTAAGCATTTCAGAATTGGGAGTGTGGTCACAACAATGAACTCTAAGTTGCAGCCATGTTACAAGGAACCAGAGGATGGTTTGTTTGAGAAATGGATTAAGCCTCATTCAAATCTGATCCACAATATGAGTGACAAACAACTATTGTGGAGAGCTTCCTTTGTTCCTCGGATCAAAAAGTATCCTTATAAAAGAGTTCCCAAGATTGCATTCATGTTCCTCACCAAGGGACCATTGCCTCTGGCACCCCTTTGGGAAAGGTTTCTGAAGGGACATGAGAAGCTTTATTCCATATATATTCATTCGCTGCCGTCGTATCAAGCGCGATTTCCTCCTTCGTCTGTTTTTTATAAACGGCAAATCCCTAGCCAGGTTTCCGAGTGGGGAAAAATGAACATGATTGATGCTGAAAGAAGACTACTTGCTAATGCATTGCTTGATATCTCCAATGAGTGGTTTATTCTTCTGTCTGAATCATGCATTCCTCTCTACAAATTTAGTTTCATCTACAACTACATAATGAAATCCAAATACAGCTTCGTGGGTGCATTCGATGATCCTGGTCCCTATGGAAGAGGGCGCTACGATCCGGACATGGCCCCTATCGTAAATATTACAGAGTGGCGCAAAGGCTCTCAATGGTTCGAAATAAAACGAAAGCTTGCCATAATCATTGTGGAAGACACTACATTTTATCCCAAATTTGAACAATATTGTCCACCACCTTGCTACGTCGACGAGCACTATTTCCCAACCATGTTGACAATTCTTGCAGGGAATGCTTTGGCAAATAGGAGCTTAACTTGGGTGGACTGGTCTAGGGGTGGAGCTCACCCAGCTACATTTGGAAGAACAGATATAAATGAAGACTTTCTCAATCGAGTTCGGGGTGGTAACGAATGCCTATACAACAATAGAAACTCTTCAGTTTGTTTTCTTTTTGCCCGAAAATTTGCGCCTAGTGCATTGGAACCTTTGGTACATATGGATTCAAAGGTCTTGGGCTTCTGA 1149 0.4143 MQSRVLHLEEGKERMNQTKGLPLRLLRLFMMFIAVCVVFSIISMYTIKHFRIGSVVTTMNSKLQPCYKEPEDGLFEKWIKPHSNLIHNMSDKQLLWRASFVPRIKKYPYKRVPKIAFMFLTKGPLPLAPLWERFLKGHEKLYSIYIHSLPSYQARFPPSSVFYKRQIPSQVSEWGKMNMIDAERRLLANALLDISNEWFILLSESCIPLYKFSFIYNYIMKSKYSFVGAFDDPGPYGRGRYDPDMAPIVNITEWRKGSQWFEIKRKLAIIIVEDTTFYPKFEQYCPPPCYVDEHYFPTMLTILAGNALANRSLTWVDWSRGGAHPATFGRTDINEDFLNRVRGGNECLYNNRNSSVCFLFARKFAPSALEPLVHMDSKVLGF 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0618 382 Pfam Core-2/I-Branching enzyme 115 341 IPR003406 GO:0016020|GO:0016757
Lal25g0618 382 PANTHER - 4 381 - -
Lal25g0618 382 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 4 381 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0618 Lal-Chr25 4700787 4705059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0618 - - gmx:100819890 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0618 25 4700787 4705059 Lal10g0743 10 15134170 15138289 LSH