Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0616 ATGAAGGACCAAACAAATGATACAGAGAAAGATGATAAACCTCAAGATATCAAACTTTGGGCAATTTTCTTATTCGGTTTAATTGGTGCCACAGCTTCTAGGTTTGCTCTGTCCAGGTCGCGGGGCAGTTCTTTCCGATCGGCTTTTCAGGAAGAAGCATGGAAAAGGTACAATAAACGATTGCAAGAGGAATACGAGGAGGAGATGGAGAGAGTGGAACGAATAAGGCGTATGCAAAATGTATTTAACCGAGAAAGGAACAAGCATAAAAGAAACTACGAAAGCTGGACAGAAAATGGTACTGGTGCATACCATCAGCATTCCCAGAGGGATGATTGGTATTGGAAGGCCGAAGAAACATTCAGAGACCAGTGGTCCAATTATCGAAACACTCCAAGAGATAACGGAAACTATTCATTGTCACATCACTACTCAGTTTTGGGTCTTGATAGGTCTAGAACAACACCATATACAGATGCTGAGATTAAGATAGCATTCAGGAATAAGGCAAAGCAGCATCACCCTGATCAGAACCAGGATAATAAAGAAGCTGCTGAGACTAAGTTCAAAGAGGTAATGTGTTCATATGAGGCCATACAACAAGAAAGAAAGAACCAGAATCTGTAA 627 0.4115 MKDQTNDTEKDDKPQDIKLWAIFLFGLIGATASRFALSRSRGSSFRSAFQEEAWKRYNKRLQEEYEEEMERVERIRRMQNVFNRERNKHKRNYESWTENGTGAYHQHSQRDDWYWKAEETFRDQWSNYRNTPRDNGNYSLSHHYSVLGLDRSRTTPYTDAEIKIAFRNKAKQHHPDQNQDNKEAAETKFKEVMCSYEAIQQERKNQNL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0616 208 ProSiteProfiles dnaJ domain profile. 142 204 IPR001623 -
Lal25g0616 208 Pfam DnaJ domain 143 206 IPR001623 -
Lal25g0616 208 PRINTS DnaJ domain signature 144 162 IPR001623 -
Lal25g0616 208 PRINTS DnaJ domain signature 166 181 IPR001623 -
Lal25g0616 208 PRINTS DnaJ domain signature 184 204 IPR001623 -
Lal25g0616 208 SUPERFAMILY Chaperone J-domain 93 204 IPR036869 -
Lal25g0616 208 CDD DnaJ 143 192 IPR001623 -
Lal25g0616 208 PANTHER HEAT SHOCK PROTEIN-BINDING PROTEIN 7 208 - -
Lal25g0616 208 Gene3D DnaJ domain 136 208 IPR036869 -
Lal25g0616 208 Coils Coil 51 78 - -
Lal25g0616 208 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 208 - -
Lal25g0616 208 SMART dnaj_3 141 204 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0616 Lal-Chr25 4673030 4677686 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0616 - - gmx:100804936 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0616 25 4673030 4677686 Lal25g0616 25 4673030 4677686 ECH
Lal25g0616 25 4673030 4677686 Lal21g0254 21 1676798 1679592 PCT
Lal21g0254 21 1676798 1679592 Lal25g0616 25 4673030 4677686 PCT