Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0722 ATGTATAGGCCTGTGGCTACTTCAGCCATACCCCGGGGCGGATTGCCTAATGATAATGGGGATTCTGTTGTTACTTTAGATCAAGTTCCGCGGTGGATTGATGCTGAGCATTCCTTGGGGTATGACAATGAAGATTCGACTTCATTCTTTCCTGATCCTTTGGCATCTCAGCCGGGCACCGATAGTGGTGGCAGTGGTTTGGTGTCAAGGTTTCCTGTTGACCATGAAGTTAATTCGAGGATATACTTGTGGAGGGGGAATCCCTGGAATCTTGAGGTGGATGCTGTGGTAAATTCAACAAATGAGGTTTTGGATGAAGCACACAGCAGTCCTGGGTTGCATGCTGCAGCTGGACCTGGTCTTGCAGAAGAATGTGCAACTTTGGGTGGATGTCGCACAGGGATGGCTAAAATTACCAATGCCTATGAACTTCCTGCAAGGAAAGTTATCCATACTGTTGGCCCGAAGTATGCTGTGAAGTATCACACTGCTGCAGAGAACGCTTTAAGTCATTGCTACCGTTCTTGCCTGGAGCTACTAATTGAATATGGGCTTCAAAGCATTGCTACAGGCTGCATTTATACAGAAGCAAAGAACTATCCCCGTGAACCAGCTGCACATGTAGCCATGAGAACTGTGCGGCGGTTTCTTGAAAAGCAGAAAGACAACATAACAGCTGTTGTCTTTTGCACTACCAACACAACCGATACTGAGATATATAAAAGGTTACTCCCACTTTACTTTCCAAGGGATACGCATGAGGAGGAGGTGGCTTTGTCAAAGCTTCCTGCAGATGTTGGGGATGAAAATGGCGAGACTGTCATAGATGAGCGTAAAATCAGAATAAAGCCTTTGCCTAAAAAGAATATTCCAAAACCCCTGGTTGATCTTCCTGTTCGTGATGTTGGCTTGATTCGCAGGACTTCATCATATTTAGATACATTTCTGGATCCTGCCTTCATGTCTTTGATTAAAGACCCCGATGAAAGACGACTGGAGCAATGGGAGAAAACAGTTCAAGCACAAAGGGGCTGGAATGTTGCTAAATTGCTTGGACTTGGTGACCTTGGTGGACCTCCATTGTCTGCTGCGGAAGAATATTCTCTGCACTCTAGATATCTTTCTAAAGCAAATTCTTTTAATCTATCTGAAATTGCAGAGATGAAAATTGTATATCGTGGAGGGGTAGATAGTGAAGGTCGTCCCGTCATGGTTGTTGTGGGGGCTCACTTTTTGCTCAGATGTCTTGATCTGGAGCGATTTGTGCTCTACGTGGTGAAGGAGTTTGAGCCGATAATACAGAAGCCTTATACTATTGTCTACTTCCACTCTGCTGCATCTCTGCAATTGCAACCAGACATGGGTTGGATGAGAAGACTACAAGAAATACTCGGTCGCAAGCACCAGCACAACCTTCACGCAATATATGTCCTTCACCCAACTTTGGGATTAAAAGTGGCAATATTTGGGCTTCAGTTGCTCGTGGACACAGCCGTTTGGAAGAAAGTGGTATATGTTGATAGACTACTGCAGCTCTTCCGATATGTACCTCGCGAGCAGCTGACCATCCCGGATTTCGTATTTCAGCATGACTTAGAAGTGAATGGAGGAAAGGGTCTTATTGTGGATCCAAGAACAAAATATGTATATCAAAGACCATGA 1662 0.4489 MYRPVATSAIPRGGLPNDNGDSVVTLDQVPRWIDAEHSLGYDNEDSTSFFPDPLASQPGTDSGGSGLVSRFPVDHEVNSRIYLWRGNPWNLEVDAVVNSTNEVLDEAHSSPGLHAAAGPGLAEECATLGGCRTGMAKITNAYELPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIEYGLQSIATGCIYTEAKNYPREPAAHVAMRTVRRFLEKQKDNITAVVFCTTNTTDTEIYKRLLPLYFPRDTHEEEVALSKLPADVGDENGETVIDERKIRIKPLPKKNIPKPLVDLPVRDVGLIRRTSSYLDTFLDPAFMSLIKDPDERRLEQWEKTVQAQRGWNVAKLLGLGDLGGPPLSAAEEYSLHSRYLSKANSFNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPIIQKPYTIVYFHSAASLQLQPDMGWMRRLQEILGRKHQHNLHAIYVLHPTLGLKVAIFGLQLLVDTAVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYQRP 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0722 553 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 381 527 IPR001251 -
Lal22g0722 553 CDD Macro_GDAP2-like 79 247 IPR035793 -
Lal22g0722 553 Pfam Divergent CRAL/TRIO domain 400 531 IPR001251 -
Lal22g0722 553 SUPERFAMILY Macro domain-like 72 277 IPR043472 -
Lal22g0722 553 MobiDBLite consensus disorder prediction 43 64 - -
Lal22g0722 553 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 533 - -
Lal22g0722 553 Gene3D Leucine Aminopeptidase, subunit E, domain 1 16 253 IPR043472 -
Lal22g0722 553 MobiDBLite consensus disorder prediction 1 23 - -
Lal22g0722 553 Gene3D - 383 534 IPR036865 -
Lal22g0722 553 CDD SEC14 388 524 IPR001251 -
Lal22g0722 553 Pfam Macro domain 97 209 IPR002589 -
Lal22g0722 553 MobiDBLite consensus disorder prediction 43 67 - -
Lal22g0722 553 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 533 - -
Lal22g0722 553 SUPERFAMILY CRAL/TRIO domain 382 521 IPR036865 -
Lal22g0722 553 ProSiteProfiles Macro domain profile. 68 248 IPR002589 -
Lal22g0722 553 SMART YBR022w_8 80 209 IPR002589 -
Lal22g0722 553 SMART sec14_4 384 530 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0722 Lal-Chr22 5158029 5165978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0722 K24997 - cit:102618722 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0722 22 5158029 5165978 Lal22g0722 22 5158029 5165978 ECH