Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0629 ATGGCGGAGAAACAACTCATCGTGGCGGTGGAAAGCACCGCCGCTATGGGACCCTATTGGGACACCATTCTCATGGATTATCTTGATAAGATCATCAGGTGTTTTGGTGGGATTGATTCAACTGTGCAGAAGCCTTCTGCTTCCAACATTGAGTTTGCCTTAGTCACCTATAATACTCATGGATGTTATTCTGGTTGCCTCGTGCAACGGACTGGCTGGACAAGAGACCCTGATGTTTTCTTCTTATGGCTATCAGCTATACCCTTTACCGGTGGTGGTTTTAATGATGCAGCAATTGCTGAAGGCCTTTCTGAAGCTCTTATGATGTTCCCAAATTCTCAAAGTGGAGGTCCAAATCAGCAGAATGTGGACATGCACAGGCATTGTATCCTTGTTTCTGCAAGTAATCCTTATCCGTTGCAGACACCAGTTTATATACCTCGACTGCAGAATCTAGAGCAGAGTGAAAGCATTGACTTAGACCCAGCTAGCCGTTTATATGATGCTGAAGCTGTTGCTAAAGCATTTCCTCAGCTTTCTGTGTCTCTATCAGTCATCTGCGCAAAACAACTTCCCAAAGTTAAAGCCATCTACAATTCGGGAAAACGTAACAGTAGAGCAGCTGATCCACCAGTTGATGTTAAAAACAATCATTTCCTTATTTTGATATCAGAAAGTTTCATGGAAGCCTGTGCTGCTTTAAGTCGTTCTGGGATCACAAGTTTGCCCTCAAATCAGAGTCCTGTTAAAGTAGACGCCGTCTCAACTACACAAGTTATAGGGGCACCCCCAAATTCAATGTCATCAGTTAATGGTTCTATTGCAAACCGGCAACCAATTTCTTCTGGGAATGTGCCATCTGCTACTGTAAAAGTGGAGCCAGTTCCCGTAAGTTCTATGGTAGCTGGACCTACTTTTCCTCATAATTCGTCAGTTCCGCGTGCTACTAGTACTGGTCAAGCAGTTCCAAGCTTGCAGACGTCTTCTCCAGCTTCAACTTCGCAAGATATTGTCACAAGTAATGAAAATATGCAGGATACAAAGCCTGTAGTATCAATGTTGCAGTCCATACGGCCAGTGAATCCAGCTCAAGCAAATGTGAACATTTTGAACAATCTGTCTCAAGCACGGCAGGTAATGAACTCTGCTGCCTTAAGTGGTGGAACCTCCATGGGACTTCAGTCAATGGGTCAGACTCCTGTTGCTATGCACATGTCAAATATGATATCTAGTGGGATGGCATCTTCTGTACCTGTGGCTCAAAATGTATTTTCATCTGGCCAGTCTGGAATGACATCAATAACTAGTTCTGGGCCTCTTACTGGTCCTGTGCAGGTTGGACAAAACTCAGGTCTTGGTTCATTAACTTCAGCCACTTCCAAATTGTCTGGAAGTTCAAACATTGGGATTTCACAACCATCAGGTAACCTGCAAGTGGCTGTTAGTATGGGACAACAGGTGCAAGGTATGAGCCAAGGAAACCTTTCAGGAGCCCAAACAGTGCAAAGTGGAGTTAACATGAACCAAAATGTGATGGGTGGTCTTGGTCCATCAGTTGTCTCTTCTGGGAATGGCACAATGATTCCTACTCCAGGAATGTCTGAACAAGCACAATCAGGTATGCAGTCACTTGCGAACAACACTGCAGCTAATATGACTTTGCCACAACAGGGATCAGGTGGTATGCAATCTACACAACAACAATCCAAATATGTGAAGGTTTGGGAGGGAAGCTTATCTGGTCAAAGACAAGGACAACCTGTATTCATCACCAAACTCGAAGGTTATAGGAATTTTTCTGCCTCTGAGACACTTGCAGCAAATTGGCCCCCTGTGATGCAAATAGTTCGGCTAATATCTCAAGACCACATGAATAACAAGCAATATGTTGGAAAGGCAGATTTCCTAGTTTTTCGGGCAATGAATCCACACGGTTTTCTTGGTCAGCTGCAGGAAAAGAAGCTGTGTGCAGTTATCCAATTACCTTCTCAGACATTGCTACTATCTGTTTCTGACAAAGCCTTCCGCTTGATTGGGATGCTTTTTCCTGGGGATATGGTTGTATTTAAGCCACAATTATCCAGTCAACAACAGCAACAAATGCAACAGCAGCAGATGCAATCACAACAGCAACATCTTCCACAATTGCAACAGCAACAGCATCCTCACATGCAGCAGCAGCAACTCCCACAAATGCAACAGCAGCAGCAGCAACTTCCACAGATGCAACAACAGCAGCAGCAACTTCCGCAGATGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCTTTCTCAGCTACAACAGCAGCAACTTCCAGCAATGCAGCAACAACAGCTTCAGCAGCAACAACAGCAACAACTCTCACAACTGCAGACCCAACAACAACAACTTCCACAATTACAGCAACTGCAGCATCAACAACTTCCTCAGCAGCAACAAATGGTTGGAGCGGGAATGGGTCAAGGATACGTTCAAGGGCCTGGGCAGCGGTCACAAATGGTTTCACAAGGACAAGTTTCATCACAAGGAACCAATAACATTGGTGGAGGAGGCTTCATGAGTTAG 2583 0.4483 MAEKQLIVAVESTAAMGPYWDTILMDYLDKIIRCFGGIDSTVQKPSASNIEFALVTYNTHGCYSGCLVQRTGWTRDPDVFFLWLSAIPFTGGGFNDAAIAEGLSEALMMFPNSQSGGPNQQNVDMHRHCILVSASNPYPLQTPVYIPRLQNLEQSESIDLDPASRLYDAEAVAKAFPQLSVSLSVICAKQLPKVKAIYNSGKRNSRAADPPVDVKNNHFLILISESFMEACAALSRSGITSLPSNQSPVKVDAVSTTQVIGAPPNSMSSVNGSIANRQPISSGNVPSATVKVEPVPVSSMVAGPTFPHNSSVPRATSTGQAVPSLQTSSPASTSQDIVTSNENMQDTKPVVSMLQSIRPVNPAQANVNILNNLSQARQVMNSAALSGGTSMGLQSMGQTPVAMHMSNMISSGMASSVPVAQNVFSSGQSGMTSITSSGPLTGPVQVGQNSGLGSLTSATSKLSGSSNIGISQPSGNLQVAVSMGQQVQGMSQGNLSGAQTVQSGVNMNQNVMGGLGPSVVSSGNGTMIPTPGMSEQAQSGMQSLANNTAANMTLPQQGSGGMQSTQQQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNFSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQLSSQQQQQMQQQQMQSQQQHLPQLQQQQHPHMQQQQLPQMQQQQQQLPQMQQQQQQLPQMQQQQQQQQQQQQQQQQLSQLQQQQLPAMQQQQLQQQQQQQLSQLQTQQQQLPQLQQLQHQQLPQQQQMVGAGMGQGYVQGPGQRSQMVSQGQVSSQGTNNIGGGGFMS 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0629 860 Coils Coil 742 775 - -
Lal22g0629 860 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25 1 776 - -
Lal22g0629 860 MobiDBLite consensus disorder prediction 818 860 - -
Lal22g0629 860 Pfam Mediator complex subunit 25 von Willebrand factor type A 3 225 IPR021419 -
Lal22g0629 860 MobiDBLite consensus disorder prediction 831 860 - -
Lal22g0629 860 Coils Coil 779 802 - -
Lal22g0629 860 MobiDBLite consensus disorder prediction 699 734 - -
Lal22g0629 860 MobiDBLite consensus disorder prediction 304 337 - -
Lal22g0629 860 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25 1 776 IPR045105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0629 Lal-Chr22 4410716 4419161 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0629 22 4410716 4419161 Lal22g0629 22 4410716 4419161 ECH
Lal22g0629 22 4410716 4419161 Lal6g0700 6 4597689 4606879 LSH