Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0255 ATGGACATTGCTGCACTTTTAACTTCTGCAGGAATTAATATCGTTTTGTGCGTAGTGCTCTTTTCACTCTATTCAATATTAAGGAAACAACCCAGCAATGTTAATGTGTACTTTGGAAGAAGGCTAGCCACTCGGCGTGACAAACATGTTGATCTGTTGGAAAGGTTTGTGCCCTCTCCTACATGGGTAATGAAAGCATGGGAAACAACTCAAGATGAAATTCTAGCTCTTGGTGGCATGGATGCTGTGGTATTCAGCAGAATGCTTGTGTTCAGCATTCGTGTGTTTTCTGTTGCTGCCATTGTGTGTACTATTATAGTGCTTCCAGCGAATTACTATGGTCAGGTCAGAAAACATAAGGATATACCTTTCGAGTCATTGGAAGTATTTACCATTGAGAATGTCAAGGAAGGATCCAGGTTGCTTTGGGCTCATTGTCTTGCATTATACATCATAACTTTAGCAGCTTGTACTCTTCTTTACTTTGAATATAAGAACATTGCAAATTTGCGGCTAGTACATATTGTTGGATCGGCTCCAAATCCAAGTCATTTTTCAATTCTTGTTAGAGGAATACCCTGGTCTCCAGAAGAATCATACTATGACACAGTGAAAAAGTTTTTCTCATATTACCATGCATCAACATATTTGTCACACCAAATGGTGTATAAGTCTGGTACAGTTCAGAAAATGAAGGATGATGCAGAACTTATGTATAAGATGCTTGGTGATTCGTTAGGAAAGAGTTGTAAGCCAAGTTTTCCACAATGTTGCTTTTGTGGAGGATCTACAAATTCTTTTAAGATGATTTCTAATGAGATGGATAGTATGCATGGGAGAACAGGTTACACAGACAGACATATAGATGCAAGAAAAAAGGAATGTGCAGCGGCTTTTGTGTTCTTTAAAAGTCGGTATGGTGCTCTCATGGCTGCCCAAAATCTTCAAACATCAAATCCTATGTTGTGGGTCACAGACCTAGCACCTGAACCAAATGATGTTTACTGGACCAATCTTTCCCTACCTTATAAGCAACTTTGGGTTCGGAAGATAGCTACGGTTGCTTCCTCTGTCACCTTCATGCTTGTATTCCTTATCCCTGTCACATTTGCACAAGGATTGACTCAACTAGACAAGCTTGAGAAAATGTTTCCTTTTTTGACTGAGATACTTCAAAAGAAATTTATGAGTGAGGTGGTGATTGGTTATCTGCCAAGTGCAATATTGGTTTTATTTTTATGTGCTGTGCCACCAGTAATGATGCTATTTTCGGCAGTGGAGGGTTCTATTTCCCGAAGTGGAAGGAAGAAGAGTGCATGCTACAAAGTTTTGTACTTTACAATTTGGAATGTGTTCTTTGTTAATGTATTTGCCGGATCTGTTATTAGCCAACTCTCAGTATTTTCTAGTTTAACAGAATTACCTGCCCAACTTGCCAAAGCAGTACCAGCACAGGCTACGTTCTTCACAACATATGTTTTGTCATCTGGTTGGGCAAGCTTGGCATGTGAAATTATGCAATTGTTTCCTCTTTTCTGTAATCTGTTTCAGAGATTCGTGCTTAGGTGTAATGATGATTCAATGGATGGAACCCTATCTTTTCCATACCATACAGAAGTTCCAAGGGTCTTACTTTTTGGGTTTCTTGGGTTCACTTGTTCTATTTTGGCACCCCTAATATTGCCCTTCTTATTCTTCTACTTTTTCCTTGCATACCTTGTTTACAGAAACCAGATTCTCAATGTGTATGTTACAAAATATGATGGTGGGGGACAATACTGGCCCATTGCTCACAACACTACGGTCTTTTCTCTTATCTTCGCTCAAATTATTGCACTTGGGGTGTTTGGACTTAAACAATCAACAGTAGCATCTGGTTTTACCATTCCACTGCTCCTTGGTACCCTTCTATTTCACCAATATTGTAGAGAGAGATTTCTCCCTGTATTTAGGAACACTGCAGCACAGGTTCTTATTGACATGGATAAGAGAGATGAGCGTTGTGGAAGGATGAAAGATATTTATAATGAGTTGCATACAGCTTATTGCCAATTCTCTAGTGGTTCAAGTCAATCAGAATGCTTCGGTAACCATCATCACGAGGAAAGCACACGTGCTAACCCTCCTCAAGATTTGGAGACAGGCAAGGAAAATAGCAAAAAAGATATGTCATGGCTGCCAGTTCATCGAAGTTCTTAG 2199 0.3952 MDIAALLTSAGINIVLCVVLFSLYSILRKQPSNVNVYFGRRLATRRDKHVDLLERFVPSPTWVMKAWETTQDEILALGGMDAVVFSRMLVFSIRVFSVAAIVCTIIVLPANYYGQVRKHKDIPFESLEVFTIENVKEGSRLLWAHCLALYIITLAACTLLYFEYKNIANLRLVHIVGSAPNPSHFSILVRGIPWSPEESYYDTVKKFFSYYHASTYLSHQMVYKSGTVQKMKDDAELMYKMLGDSLGKSCKPSFPQCCFCGGSTNSFKMISNEMDSMHGRTGYTDRHIDARKKECAAAFVFFKSRYGALMAAQNLQTSNPMLWVTDLAPEPNDVYWTNLSLPYKQLWVRKIATVASSVTFMLVFLIPVTFAQGLTQLDKLEKMFPFLTEILQKKFMSEVVIGYLPSAILVLFLCAVPPVMMLFSAVEGSISRSGRKKSACYKVLYFTIWNVFFVNVFAGSVISQLSVFSSLTELPAQLAKAVPAQATFFTTYVLSSGWASLACEIMQLFPLFCNLFQRFVLRCNDDSMDGTLSFPYHTEVPRVLLFGFLGFTCSILAPLILPFLFFYFFLAYLVYRNQILNVYVTKYDGGGQYWPIAHNTTVFSLIFAQIIALGVFGLKQSTVASGFTIPLLLGTLLFHQYCRERFLPVFRNTAAQVLIDMDKRDERCGRMKDIYNELHTAYCQFSSGSSQSECFGNHHHEESTRANPPQDLETGKENSKKDMSWLPVHRSS 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0255 732 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 718 IPR045122 GO:0005227
Lal21g0255 732 MobiDBLite consensus disorder prediction 714 732 - -
Lal21g0255 732 Pfam Calcium-dependent channel, 7TM region, putative phosphate 349 616 IPR003864 GO:0016020
Lal21g0255 732 Pfam Cytosolic domain of 10TM putative phosphate transporter 184 338 IPR027815 -
Lal21g0255 732 MobiDBLite consensus disorder prediction 694 732 - -
Lal21g0255 732 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 718 - -
Lal21g0255 732 Pfam Late exocytosis, associated with Golgi transport 6 163 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0255 Lal-Chr21 1681985 1687977 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0255 K21989 - gmx:100789875 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0255 21 1681985 1687977 Lal21g0255 21 1681985 1687977 ECH
Lal17g0143 17 887825 895274 Lal21g0255 21 1681985 1687977 LSH
Lal8g0697 8 4944397 4955620 Lal21g0255 21 1681985 1687977 PCT
Lal10g0757 10 15240399 15261799 Lal21g0255 21 1681985 1687977 PCT
Lal21g0255 21 1681985 1687977 Lal8g0697 8 4944397 4955620 PCT
Lal21g0255 21 1681985 1687977 Lal10g0757 10 15240399 15261799 PCT