Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0254 ATGAGGGATAAGGCGGAGAATGATAAAAACAAAGATCCAAAGCTTTTGGGAGCTTTGCTTTTCGGATTTATTGGCGCCACAGTCACTACCTTCGCCGTGAGTTCTCCGCGTTCCTTCTATTCAATTTGTTCTACAACTTTGTTCATCGGTCGGCTACGAAGAACTGTTGAGTGGTTCTCTGTTCAGTTTTCCAAGTCACAGTCCTCTTGGAGAGGAGGGAGTGGTGGTTCTTATCGAACATCGTTTCAAGAAGAAGCATGGAGGAGGCACAATAAACGAATGCAAGAGGAGTATGAAGAGGAGTTGGAGAGAGTGGAACGGATAAGGCGTATGCAAAGTGTGTTCAATAGAGAAAGGAATAAATACAAAAGAAGCTATGAAAGCTGGAGGGAAAATGATCCTGGTGCATATCATCAGCATTCCCACAGAGAAGATTGGTATTGGAAAGCCGATACATCTTTCAGAGGCCAGAGGACTAATTATCGAGAAGCTCCAAGGGAAAGTGGAAACTATGCATTATCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAAGAACGCCATATTCAGATGCTGAAATTAAGACAGCCTTTAGGACCAAGGCAAAGGAGTATCATCCTGATCAGAACCAGAATAATATAGTGGCTTCTGAGGCTATGTTCAAAGAAGTGATGAATTCATATGAGGCCATAAAACAGGAAAGAAGAAACCAGAATTTGTGA 726 0.4242 MRDKAENDKNKDPKLLGALLFGFIGATVTTFAVSSPRSFYSICSTTLFIGRLRRTVEWFSVQFSKSQSSWRGGSGGSYRTSFQEEAWRRHNKRMQEEYEEELERVERIRRMQSVFNRERNKYKRSYESWRENDPGAYHQHSHREDWYWKADTSFRGQRTNYREAPRESGNYALSHHYSVLGLDRFRRTPYSDAEIKTAFRTKAKEYHPDQNQNNIVASEAMFKEVMNSYEAIKQERRNQNL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0254 241 SUPERFAMILY Chaperone J-domain 174 238 IPR036869 -
Lal21g0254 241 SMART dnaj_3 174 237 IPR001623 -
Lal21g0254 241 Coils Coil 84 111 - -
Lal21g0254 241 Gene3D DnaJ domain 162 241 IPR036869 -
Lal21g0254 241 PRINTS DnaJ domain signature 199 214 IPR001623 -
Lal21g0254 241 PRINTS DnaJ domain signature 217 237 IPR001623 -
Lal21g0254 241 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 239 - -
Lal21g0254 241 CDD DnaJ 176 230 IPR001623 -
Lal21g0254 241 Pfam DnaJ domain 176 237 IPR001623 -
Lal21g0254 241 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 239 - -
Lal21g0254 241 ProSiteProfiles dnaJ domain profile. 175 237 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0254 Lal-Chr21 1676798 1679592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0254 - - gmx:100812371 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0254 21 1676798 1679592 Lal21g0254 21 1676798 1679592 ECH
Lal25g0616 25 4673030 4677686 Lal21g0254 21 1676798 1679592 PCT
Lal21g0254 21 1676798 1679592 Lal25g0616 25 4673030 4677686 PCT