Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0252 ATGAAGTTCATGAATGATAGTAACACCACCACCAATGATGGAAACAGCCATCATAACTGGTTGGGGTTCTCACTCTCACCCCACATGAATATGGATGTTACTTCTTCTGTCCTTTCTCATCATCATCATCATCACTATCATGAACAACAGCAACAAGTTCAGGCTTCTGCAGCTTCTTCTGTTCCCAACACTGTTCCCACATCCTTTTATTTATCCCCTTCTAACTCAGGCTTCTCTTATGGTGAAAACGGTGTGTTCCATTCTCCTTTGACTGTTATGCCTCTTAAGTCAGATGGATCACTTTGCATCATGGAAGCTCTCACTAGATCACAGACACAAGTGATGGTGCCAAGTTCTTCACCCAAACTAGAAGACTTTCTAGGTGGTGGTGCAACTATGGGGAGACATGAATATGTAGACCATGAAAGAGAGGCAATGGCTCTAAGCTTAGACAGCATCTACTACAACCAAAATGATCATGATTCTCAAGCCAACAGAGACCATTCACTGGATCTTCTTTCAGAATCCTTCAGGAACCAAGAACATCTTCATCAACATATCAATAATCTCCAATCACATCCATATTATTCAGGTCTTACTTACCAAAGAATGTATCAACCAACACCTTCACATGAAGAACAAACCTATAAGGAAACTCACTATGCAGTGTGTGGCTCTCAAATGTCTCGAATGACAGAATATTCAACTCATCACGCTATGGTGCAACAAATGAACAGTAACATGGGGAGTGATGATCAAGGAGCTTCTGAGTCTCTTGGTACAGTAGGGTGTGGGGAGTTACAGTCTTTAACCTTATCCATGAGTCCTGGTTCTCAATCTAGCTGTGTAACAATACCAAGGAAGATCTCACCTTCTGGAACTGACTCAGTGGCTGTGGAGACAAAAAAGAGAGGGCCTGGTAAGCTTAGCCAGAAGCAACCAGTGCATAGGAAATCTATTGACACATTTGGTCAGAGAACTTCACAGTATAGAGGTGTCACAAGGCATAGGTGGACTGGAAGATATGAAGCACATTTGTGGGATAACAGCTGCAAGAAGGAAGGGCAAACTAGGAAAGGAAGACAAGGAGGTTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTTGCTGCCCTTAAGTACTGGGGTCCTTCAACTCATATTAACTTTCCCTTAGAGAATTACCAATCGGAACTTGAAGGAATGAAAAACATGAGCAGGCAGGAATATGTTGCTCACCTGAGAAGAAAAAGTAGTGGATTTTCTAGAGGTGCTTCAATGTACAGAGGGGTGACAAGGCACCACCAACATGGAAGGTGGCAAGCAAGGATAGGTAGAGTTGCTGGGAACAAGGACCTCTACCTTGGAACATTCAGCACTCAAGAGGAAGCAGCTGAAGCATATGATGTAGCTGCAATTAAATTCCGAGGCGTAAATGCAGTCACAAACTTTGACATAACTAGATACCATGTTGAAAGAATCATGGCCAGTAACACACTTCTTGCCGGCGAGCATGCAAGGAGAAACAAAGATAATGATCCAAGAACTGAGGCGATTGAGTTTAATAACAACAACGGTGTATCAAGCCAGACCAATGTGGAAGCAGTTCAAGCTAGAAACAATAATGAAAATGGTTCAGACTGGAAGATGGTTTTGTTTCAGCAGCAACAACAGTCAAATAATATATATGACCAAAAAGCTATCAATTGTGGAAATTATAGAAATTCTGCTTTCTCAATGGCCCTACAAGATCTCATTGGGATTGATTCTGTAGGTTCAGGCCAGCACATGGTGGATGAATCAAACAAGATAGGGACTCATTTTTCAAACCCTTCCTCTATGGTGACAAGTTTAAGCAGTTCCAGAGAGGCTAGCCCTGATAAAATGGGTCCCTCTCTTCTCTTTCCAAAGCCTCAAATGGAAACAAAGATTAGCAACAACTCTATTGGTAGTGGTGGGGTTAGTTCTTGGTTTACCTCTCAAATGAGGCCAGCTTCTGCTATCTCTCTCTCAAACTTGCCAGTTTTTGCTGCATGGAATGATACCTAG 2052 0.423 MKFMNDSNTTTNDGNSHHNWLGFSLSPHMNMDVTSSVLSHHHHHHYHEQQQQVQASAASSVPNTVPTSFYLSPSNSGFSYGENGVFHSPLTVMPLKSDGSLCIMEALTRSQTQVMVPSSSPKLEDFLGGGATMGRHEYVDHEREAMALSLDSIYYNQNDHDSQANRDHSLDLLSESFRNQEHLHQHINNLQSHPYYSGLTYQRMYQPTPSHEEQTYKETHYAVCGSQMSRMTEYSTHHAMVQQMNSNMGSDDQGASESLGTVGCGELQSLTLSMSPGSQSSCVTIPRKISPSGTDSVAVETKKRGPGKLSQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQSELEGMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDITRYHVERIMASNTLLAGEHARRNKDNDPRTEAIEFNNNNGVSSQTNVEAVQARNNNENGSDWKMVLFQQQQQSNNIYDQKAINCGNYRNSAFSMALQDLIGIDSVGSGQHMVDESNKIGTHFSNPSSMVTSLSSSREASPDKMGPSLLFPKPQMETKISNNSIGSGGVSSWFTSQMRPASAISLSNLPVFAAWNDT 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0252 683 MobiDBLite consensus disorder prediction 275 297 - -
Lal21g0252 683 MobiDBLite consensus disorder prediction 275 317 - -
Lal21g0252 683 SUPERFAMILY DNA-binding domain 427 487 IPR016177 GO:0003677
Lal21g0252 683 MobiDBLite consensus disorder prediction 605 627 - -
Lal21g0252 683 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 681 - -
Lal21g0252 683 Pfam AP2 domain 329 384 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 Pfam AP2 domain 429 478 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 16 681 - -
Lal21g0252 683 Gene3D AP2/ERF domain 428 488 IPR036955 GO:0003700|GO:0006355
Lal21g0252 683 Gene3D AP2/ERF domain 328 394 IPR036955 GO:0003700|GO:0006355
Lal21g0252 683 PRINTS Ethylene responsive element binding protein signature 330 341 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 PRINTS Ethylene responsive element binding protein signature 468 488 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 ProSiteProfiles AP2/ERF domain profile. 428 486 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 ProSiteProfiles AP2/ERF domain profile. 329 392 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 CDD AP2 427 488 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 MobiDBLite consensus disorder prediction 36 59 - -
Lal21g0252 683 MobiDBLite consensus disorder prediction 505 527 - -
Lal21g0252 683 CDD AP2 328 392 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 MobiDBLite consensus disorder prediction 605 630 - -
Lal21g0252 683 SMART rav1_2 428 492 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 SMART rav1_2 329 398 IPR001471 GO:0003700|GO:0006355
Lal21g0252 683 SUPERFAMILY DNA-binding domain 328 394 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0252 Lal-Chr21 1656702 1661389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0252 409 683 AP2-EREBP Transcription Factor Family AT4G37750 28.333 5.06e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Lal21g0252 AP2 4.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0252 K09285 - gmx:100787223 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0252 21 1656702 1661389 Lal21g0252 21 1656702 1661389 ECH
Lal21g0252 21 1656702 1661389 Lal4g0158 4 984112 988655 LSH
Lal8g0851 8 6173734 6178147 Lal21g0252 21 1656702 1661389 PCT
Lal10g0761 10 15309532 15313287 Lal21g0252 21 1656702 1661389 PCT
Lal21g0252 21 1656702 1661389 Lal8g0851 8 6173734 6178147 PCT
Lal21g0252 21 1656702 1661389 Lal10g0761 10 15309532 15313287 PCT