Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0143 ATGGACATTGCTGCACTTTTAACTTCAGCTGGAATTAATGTACTTCTGTGTGCGGTGCTCTTTTCACTCTATTCAATATTAAGGAAACAGCCCAGCAATGCTAATGTATACTTTGGAAGAAGGCTAGCCTCCCGGCGTGACAAACATGTTGATCTCTTGGAAAGATTTGTGCCCTCCCCTACATGGGTCATGAAAGCATGGGAAACAACGCAAGATGAAATACTGAGTATTGGTGGCATGGATGCTGTGGTTTTCAGCAGGATGCTTGTGTTCAGGTTGTTCCTTCCTCCTAAAATTGAAACTTCTTTTAGCAGTACCTGTATTATTCGTATATTTTCTGTTGCTGCCGCCATCTGTACTATTCTTGTACTTCCAGCGAATTACTATGGTCAGGACAGAATACATAAGGATATACCTTTTGAGTCACTGGAAGTATTTACCATTGAGAATGTCCAGGAAGGATCCAGGCTTTGGGCTCATTGTCTCGCACTATACATCATAACTTTAGCTGCTTGTACTCTTCTTTACTTTGAATTTAAGAATGTTGCAAATTTGCGGCTAGTACATATTATTGGATCGGCTCCACATCCAAGTCATTTTGCAATTCTTGTCCGAGGAATACCCTGGTCTTCAGAAGAATCATACTATGACACAGTAACAAAGTTTTTCTCATATTACCATGCATCAGCATACTTGTCACACCAAATGGTGTATAAGTCTGGGACAGTTCAGAAAATGAAGGATGATGCAGAACTAATGTATAAGATGCTTGGTGATTCGTTGGGAAAGACCTGTAAGCCAAGTTTTTCGCAATGTTGCTTTTGTGGAGGACCTACAAATTCTTTTAAGAAAATTTCTAATGAAATAGATAGTATACATGGGAGAACAGGTTACACGGACAGACATATAGATGGAAGAAAAAAGGAATGTGCAGCCGCTTTTGTGTTCTTTAAAAATCGGTATGCTGCTCTCATGGCTGCCCAGAATCTTCAAACATCAAATCCTATGTTGTGGGTCACAGACCTAGCTCCTGAACCAAATGATGTTTACTGGACCAACCTTTGCATACCATATAGGCAACTTTGGGTTCGTAAGATAGCTACGGTTGTGGCATCCATCACGTTCATGCTTGTATTCCTTATCCCTGTCACATTTGCACAAGGGCTGACTCAACTGGACAAGCTTGAGAAAATGTTCCCATTTTTGACAGAGATACTTCAAATGAAATTTATGAGTGAGGTGGTGATTGGTTACCTGCCAAGTGCAATTTTGGTTTTATTTTTATGTGCTGTTCCACCAGTAATGATGCTATTTTCGGCAGTGGAGGGTTCTATTTCCCGTAGTGGAAGGAAGAAGAGTGCATGTTACAAAGTCTTGTACTTTACAATTTGGAATGTGTTCTTTGTTAATGTATTTGCCGGGTCTGTTATTAGTCAACTCTCAGTGTTTTCTAGTATAACAGAACTACCTGCCCAACTTGCCAAGGCAGTACCAGCGCAGGCTACCTTTTTCACAACATATGTTTTATCATCGGGCTGGGCAAGCTTGGCATGTGAAGTTATGCAATTGTTTCCTCTTTTCTGCAATCTGTTCCAGAGATTTGTTCTCAGGTCTGGTGATGATTCACTTGATGGCACCCTATCTTTTCCATACCATACAGAAGTTCCAAGGGTCTTACTGTTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCCCTAATATTGCCTTTCTTAGTGTTCTACTTTCTCCTTGCATACCTCGTTTACAGAAACCAGATTCTGAATGTGTACGTTACAAAATATGATGGTGGGGGACAATACTGGCCCATAGCTCACAACACAGTTGTCTTTTCATTGATCTTTGCTCAAGTTATTGCACTGGGGGTGTTTGGACTGAAACAATCAACAGTGGCATCTGGTTTTACCATTCCACTGCTGCCTGGTACCCTTCTATTTCACCAATATTGTAGGGAGCGATTTCTCCCAGTATTTAGGAACACTGCATCACAGGTTCTTATTGACATGGATAAGAGAGATGAGCGGTGTGGAAGGATGAACGATATTTATAATCATTTGCATACAGCCTACTGCCAATTCTCTAGTGATTCTAGTAAATCTGAATGCTTCAGTAGTCATCACAAGGAAAGCACACGTGTTCACCCTCCAGAGGATTTGGAGACAGGCAAGGAAAATAGCAATAAAGATATGTCATGGCCGCCAGTTCATCGTAGTTCTTAG 2241 0.411 MDIAALLTSAGINVLLCAVLFSLYSILRKQPSNANVYFGRRLASRRDKHVDLLERFVPSPTWVMKAWETTQDEILSIGGMDAVVFSRMLVFRLFLPPKIETSFSSTCIIRIFSVAAAICTILVLPANYYGQDRIHKDIPFESLEVFTIENVQEGSRLWAHCLALYIITLAACTLLYFEFKNVANLRLVHIIGSAPHPSHFAILVRGIPWSSEESYYDTVTKFFSYYHASAYLSHQMVYKSGTVQKMKDDAELMYKMLGDSLGKTCKPSFSQCCFCGGPTNSFKKISNEIDSIHGRTGYTDRHIDGRKKECAAAFVFFKNRYAALMAAQNLQTSNPMLWVTDLAPEPNDVYWTNLCIPYRQLWVRKIATVVASITFMLVFLIPVTFAQGLTQLDKLEKMFPFLTEILQMKFMSEVVIGYLPSAILVLFLCAVPPVMMLFSAVEGSISRSGRKKSACYKVLYFTIWNVFFVNVFAGSVISQLSVFSSITELPAQLAKAVPAQATFFTTYVLSSGWASLACEVMQLFPLFCNLFQRFVLRSGDDSLDGTLSFPYHTEVPRVLLFGFLGFTCSILAPLILPFLVFYFLLAYLVYRNQILNVYVTKYDGGGQYWPIAHNTVVFSLIFAQVIALGVFGLKQSTVASGFTIPLLPGTLLFHQYCRERFLPVFRNTASQVLIDMDKRDERCGRMNDIYNHLHTAYCQFSSDSSKSECFSSHHKESTRVHPPEDLETGKENSNKDMSWPPVHRSS 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0143 746 Pfam Cytosolic domain of 10TM putative phosphate transporter 200 353 IPR027815 -
Lal17g0143 746 MobiDBLite consensus disorder prediction 706 746 - -
Lal17g0143 746 MobiDBLite consensus disorder prediction 708 732 - -
Lal17g0143 746 Pfam Late exocytosis, associated with Golgi transport 107 178 IPR032880 -
Lal17g0143 746 Pfam Late exocytosis, associated with Golgi transport 6 91 IPR032880 -
Lal17g0143 746 Pfam Calcium-dependent channel, 7TM region, putative phosphate 364 631 IPR003864 GO:0016020
Lal17g0143 746 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 720 IPR045122 GO:0005227
Lal17g0143 746 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0143 Lal-Chr17 887825 895274 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0143 K21989 - gmx:100789875 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0143 17 887825 895274 Lal17g0143 17 887825 895274 ECH
Lal17g0143 17 887825 895274 Lal21g0255 21 1681985 1687977 LSH
Lal8g0697 8 4944397 4955620 Lal17g0143 17 887825 895274 PCT
Lal10g0757 10 15240399 15261799 Lal17g0143 17 887825 895274 PCT
Lal17g0143 17 887825 895274 Lal8g0697 8 4944397 4955620 PCT
Lal17g0143 17 887825 895274 Lal10g0757 10 15240399 15261799 PCT