Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1517 ATGGTGGATATGGATGGTTTTGGAGCTGGAGAACTTCCCAACACAGAGGATCTTATGCAATTCGAGAATGTTCCCAAAGAAGGTGCAGTTTTTGATGCATCACAATATGCATTCTTCGGTAAAAATGCCACTGAGGAAGTTGAGTTGGGAGGGTTAGAAGAAGATGTATATTTGCCTGCTCTTGAATCTAATGAGGAGTTCTTTCTCAATAGAGAAGAGGCTGAAGATGTAAGATCTCTTTCTGATATTGATGATCTTACTACAACTTTCTTGAAGTTGAACAAGGTTGTAAGTGGACCAAGAAGCCCAGGTGTTATTGGCGACCGTGGATCAAGAGAGAATTCTATTTCGGAATGGGAACAAAGGGATGGTGTTCTAAACTGGGTTGATCAGAATGCTTATGATAGTGAAGGTTCTTTGGATGGCAAACATTGGTCATTACGACCCCACTCTTCTGTCACCAGTTTACCCGATTCTAAGTCCTTGTATAGAACATCTTCATATCCTGAGCAGCAAATGCAGCAGCAACATCACCACCTCCAACATTGCTCTAGTGAACCGGTTAATAACTGGCTTGATCAGCCTTTTTATGATACAGAAACTGCTCAAGATGACGGAAGGCGATGGTCATCACAGTCTTATTCATCCATTGCGCATTTACAAGAGTCAAAACCCCTGTACAGAACATCTTCATACCCTGACAAGCAACAGGAGCTTCTTCGTTTTTCTAGTGAACCAATTTTGGTACCAAAGTCTTCGTTTACTTCTTATCCTCCCCCCTGTGGTCGATCTCAGCAGGCTTCTCCAAGTCATAGTACAGGCCACTTGAACATTCCTTATCAAGATGTAGGATCTCAGATGGAACTATCATCTCAAAATCGTTCTCATTTCTCCAATTCTGCACTACAGTTTAGTGGATTAAACCATGGGTCACATTTTAGTGGAAACATGCGCCAATTATCTACTGGTTCCTCTTTTAATCACCGAATACAAAATCAAATGATCAACCAGGCAGGATTATATTCTGGAGATCATCCGAACCTCCTTAGTAATATGTTGCAGCAACAACTGAACCTTCGTAGAGGAGTGGTATCTCCTCACTTAATGTCTCAATTGCAACATCAGCAGCATAGACTGCATCGTCCTGTTCAGCAATCTGCAGGCTACGTATCTGATTTCCAGTCCCATTTATTTAATCCCTACTTATCTTCTGGCTCATCCATAATTAGCAAGTATGAACATATGCTTGGTCTTCCCGATGTTAGAGATCATAGACTGAAATCAACTCAAAAGGGTAAACATAGTCTTCGTTTCTCCAAGCAGGGTTCAGATGCCAGTAGCCAAAAGAGTGATAGTGTTCCATTGCAGTTTAGGTCCAAGCATATGACAAGTGATGAAATTGAGAGTGTTCTTAGAGTGCAGCATGCCTTGACTCATAGTAATGACCCATATGTAGATGACTATTACCACCAAGCTAGTCTTGCAAAAAAACCTTCTTTGGCTAAGTTGAAAAATCCATTTTGCCCAACCCAAATGAGGGACCTCCCTTCACGATCCCGTTCTATTTCTGAGCCGCATGCTTTCCTTCAGGTTGATGCCCTAGGGAGGGTTTTATTCTCATCTATCCGTCGGCCTCGCCCTCTTCTTGAGGTTGATCCCCCAAAGTCTTCTTTTAATGGTAGCTCTGAGCAAAATATTTCAGAGAAGCCCCTTGAACAGGAGCCTATGTTTGCAGCCAGAGTCACAATTGAGGATGCTCTGTGTCTTCTTCTTAATGTAGATGATATTGACCGTTTCCTAGAGATTAATCAGCTACAAGACGGTGGAACCCAATTAAGACTAAGACGGCAGGTCCTGTTGGAAGGACTAGCAACTTCACTTCAACTTGTTGACCCACTGGGGAAGAATGGAAATAAAGCTGGGATTGCTGCTAAGGATGACCTTGTTTTTTTGCGATTAGTATCAATTCCAAAGGGGCGTAAGCTCCTTATAAAGTATCTTCAGTTGCTTCTTCCCGGTAGTGAGCTTATGAGGATAGTCTGCATGGCCATCTTTCGTCATTTAAGATTCTTATTTGGTGGTCTCCCCTCAGATTCAGCAGCTTCAGAGATTACAAGTAACCTTATCAAGGTTGTTTGTCAATGTATCAAAGGAATGGACCTTGGTGCTCTTAGTGCTTGTCTTGCTGCAGTGGTTTGTTCCGCAGAGCAGCCTCCTTTATGCCCCCTTGGAAGTACTTCTGGAGATGGTTCTTCCATTATTTTGGTGTCTGTTCTTGAGAGGGCTACTGAACTTCTTACTGACCCTCATGCCGCTTCCAACTACAACATGGGTAATCGTTCATTTTGGCAGGCCTCATTTGATGAATTCTTTGGCCTTCTCACCAAGTATTGTATGAATAAATACCATAGTATCATGCAATCCTTGCTTAAACAAAATGCAGTAGATGTGGATGACATTGGATCAGATGCTGCTAAAGCTATTAGTATGGAAATGCCTGTTGAACTTTTGCGTGCAAGTCTTCCTCACACCGATGATCGTCAGAGGAAGTTATTACTGGATTTTGCTCAGCGTGCAGTTCCTATGGTTGGATTTAGTAGTAGTGCTGGTGGTGATGGTGGTAATCACATGAGCTCAGAGACGGTGCTAAGTTGA 2655 0.4256 MVDMDGFGAGELPNTEDLMQFENVPKEGAVFDASQYAFFGKNATEEVELGGLEEDVYLPALESNEEFFLNREEAEDVRSLSDIDDLTTTFLKLNKVVSGPRSPGVIGDRGSRENSISEWEQRDGVLNWVDQNAYDSEGSLDGKHWSLRPHSSVTSLPDSKSLYRTSSYPEQQMQQQHHHLQHCSSEPVNNWLDQPFYDTETAQDDGRRWSSQSYSSIAHLQESKPLYRTSSYPDKQQELLRFSSEPILVPKSSFTSYPPPCGRSQQASPSHSTGHLNIPYQDVGSQMELSSQNRSHFSNSALQFSGLNHGSHFSGNMRQLSTGSSFNHRIQNQMINQAGLYSGDHPNLLSNMLQQQLNLRRGVVSPHLMSQLQHQQHRLHRPVQQSAGYVSDFQSHLFNPYLSSGSSIISKYEHMLGLPDVRDHRLKSTQKGKHSLRFSKQGSDASSQKSDSVPLQFRSKHMTSDEIESVLRVQHALTHSNDPYVDDYYHQASLAKKPSLAKLKNPFCPTQMRDLPSRSRSISEPHAFLQVDALGRVLFSSIRRPRPLLEVDPPKSSFNGSSEQNISEKPLEQEPMFAARVTIEDALCLLLNVDDIDRFLEINQLQDGGTQLRLRRQVLLEGLATSLQLVDPLGKNGNKAGIAAKDDLVFLRLVSIPKGRKLLIKYLQLLLPGSELMRIVCMAIFRHLRFLFGGLPSDSAASEITSNLIKVVCQCIKGMDLGALSACLAAVVCSAEQPPLCPLGSTSGDGSSIILVSVLERATELLTDPHAASNYNMGNRSFWQASFDEFFGLLTKYCMNKYHSIMQSLLKQNAVDVDDIGSDAAKAISMEMPVELLRASLPHTDDRQRKLLLDFAQRAVPMVGFSSSAGGDGGNHMSSETVLS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1517 884 PANTHER PROTEIN PAT1 HOMOLOG 189 862 - -
Lal11g1517 884 PANTHER PROTEIN PAT1 HOMOLOG 14 188 - -
Lal11g1517 884 MobiDBLite consensus disorder prediction 427 458 - -
Lal11g1517 884 MobiDBLite consensus disorder prediction 435 458 - -
Lal11g1517 884 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 14 188 IPR039900 GO:0000290
Lal11g1517 884 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 189 862 IPR039900 GO:0000290
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1517 Lal-Chr11 18344191 18350394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1517 K12617 - gmx:100787648 1333.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1517 11 18344191 18350394 Lal1g1560 1 17970740 17978217 LSH