Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0769 ATGATGGGAGAACTTTACAAGATTAGTTCAATCGATTGGAAACCCTCACCGGTTCTCGCCTTAGCCACCAGCGTCGACGGTTTACGTGTAGCCGCGGCTCGTCAAGATGGTTCACTTGAAATATGGCTCGTCTCACCTGGTTCCATTGGTTGGCACTGTCAGTTAACCATTCTTGGTGCCTCTGATAAACGAGTTTCCTCTCTCGTTTGGTGCCCCGGTGTGTTGAATGATGAACCTTCTGGTCGTTTATTTTCTTCTCATATTGATGGTTCTGTTTCTAAGTGGGATCTTTTTCATTTGAAACAAACGACGGTGCTAGATACAGATGGTGTTTCAATCTGGAAAATGGCTGTGACCCTCCCGAAGAGGGATGTTATAAATTCTGAAACAAAAAACAATCATGTTGGAAATGGGTTCGTGAGTAAATTTCACAATTCTGATGAACACGGCGAGAACAGTGAAAGTGATGAAGATTCTGACTCAACTGATACAAATAAGCAATCTGTTACTGAGTATCCACGTGTAGCGATTGCTTATGATGATGGATGCGTGCGAATTTATGCCATCTCTGATACAGATGATTTTATGTATGTAAAGTCCTTGCCTCGGGTCAAAGGACGAGTTTTAAGTGTCACTTGGAGTACAGATGCTAACCATATATATTCTGGTAGTAGTGATGGGATAATACGATGCTGGGATGTTATATCGGGCCACGAAGTCTATAGGATTACAGCTGGACTTGGAGGTTTGGGCAGTGGACATGATCTTTGTATATGGTCATTACTGTCCTTAAGGTCTGGAGCACTTGTTAGTGCAGACAGCAGTGGTAGTGTCCAATTCTGGGACAGCCAACATGGGACTCTCTTGCAAGCACATTCATTACACAAGGGAGATGTAAATGCTCTCGCGGCAGCACCTAGTCATGATAGGGTGTTTTCTTCTGGTTCTGACGGTCAGGTTATTCTTTATAAGCTGTCTAGTCAGCCAGCGTCATCTGACGGTGTCCATTCTCCGATAATGATGAAAAAGTGGATCTATGTTCAATGTGTAAGGGCTCATACGCATGATGTTAGGGCCTTGACTGTCGCTGTACCCATAACTCAAGAAGATTCTTTGCCAGATGAGAGGGTTAAAAGAGCTCGACGTGACGAAAAACCCGTTGAGTTTAGTTACCATAAGTGGGCTCATTTGGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACAAAACTCTTCGCATACCCTGTGAAAGAATTTACTAAATTTTCTCCTCATGATATCTGTCCTGCTCCTCAAAGAACACCTATTCAACTAGTTCTTAATACTGCCTTCAATCAATCGTCAATGCTTTTAGTGCAGTCTTCGCATGGGTTAGATATCCATTTGCTACAACTCAGAAACGTTCACACAGCTGGAGGCAGTGCAAAGACTGAAATGCTTGCCCGAGTCAAGAGTAAGGCATCTCAAAAGATAATTTGCAGCACCATTTCTAATTCAGGGATGCTTTTTGCATACTCCGACCATTTGAAGCCTAATCTCTTTGAATTGAAGAGGTCTGAAGGTGGGAAAGTTACGTGGAGTGTCAGTAAAAGGAAACTTCCTTCCAGATTACCATTTGCTCATTCCATGATTTTTACTCATGACTCCTCTTGGTTGATAGTAGCTGGGCATGATAGAAGGATATATGTTGTGGATGTGGAAAGCTCAGAACTAGTGCATACTTTTACACCTTGCCGTGACTTGCAAGATGAAAAACTACCTCCAGCGGAGCCTCCGATAACAAGATTGTTCAGCAGTTCTGATAAGCAGTGGTTGGCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAACTTGGAGATACTAAGGCAGCATTGGTTCATTTCACGATTAGATGGTGCCTCTGTTACTGCTGGTGGATTTCCGCCCCAGAACAGCAATGTAATGATAATTACAACCTCCTCAAATCAAGTGTATGCATTTGACATAGAGGCCAAGGAGTTGGGAGAATGGTCAAAGCGTCACAGTTATGTTCTTCCCAGGAGATACCAGGAATTTCCTGGTGAAGTTATTGGGCTTTCATTTCCTCCCTCGTCGACTTCTTCTTCAGCTGTTGTTTATAGCTCCAGGGCAATGTGTTTGATTGACTTTGGGTTGCCTGTGGAGCAAGACGATAATGATACGCCAAATATTCAAGATCCAAGGGCCAAGAATTTGCAAAATCTCAGTGTGAAGAGGAAGATTAAGCATAAGAACTTTAATGTTTTGCCATTAGAGAATCCAGTTTTATTTCTAGCCTACATGTCAAAAAATTCCTTCTTTATGATAGACAAACCTTGGTTGGAAGTTGTCAAAAATTTAGAAACCGCACCAGTCCACAGACATATTTTTGGGACATAG 2400 0.4263 MMGELYKISSIDWKPSPVLALATSVDGLRVAAARQDGSLEIWLVSPGSIGWHCQLTILGASDKRVSSLVWCPGVLNDEPSGRLFSSHIDGSVSKWDLFHLKQTTVLDTDGVSIWKMAVTLPKRDVINSETKNNHVGNGFVSKFHNSDEHGENSESDEDSDSTDTNKQSVTEYPRVAIAYDDGCVRIYAISDTDDFMYVKSLPRVKGRVLSVTWSTDANHIYSGSSDGIIRCWDVISGHEVYRITAGLGGLGSGHDLCIWSLLSLRSGALVSADSSGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPSHDRVFSSGSDGQVILYKLSSQPASSDGVHSPIMMKKWIYVQCVRAHTHDVRALTVAVPITQEDSLPDERVKRARRDEKPVEFSYHKWAHLGVPMLISAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPIQLVLNTAFNQSSMLLVQSSHGLDIHLLQLRNVHTAGGSAKTEMLARVKSKASQKIICSTISNSGMLFAYSDHLKPNLFELKRSEGGKVTWSVSKRKLPSRLPFAHSMIFTHDSSWLIVAGHDRRIYVVDVESSELVHTFTPCRDLQDEKLPPAEPPITRLFSSSDKQWLAAVNCFGDIYVFNLEILRQHWFISRLDGASVTAGGFPPQNSNVMIITTSSNQVYAFDIEAKELGEWSKRHSYVLPRRYQEFPGEVIGLSFPPSSTSSSAVVYSSRAMCLIDFGLPVEQDDNDTPNIQDPRAKNLQNLSVKRKIKHKNFNVLPLENPVLFLAYMSKNSFFMIDKPWLEVVKNLETAPVHRHIFGT 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0769 799 Gene3D - 255 523 IPR015943 GO:0005515
Lal10g0769 799 Gene3D - 4 138 IPR015943 GO:0005515
Lal10g0769 799 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 242 IPR001680 GO:0005515
Lal10g0769 799 Gene3D - 539 732 IPR015943 GO:0005515
Lal10g0769 799 SUPERFAMILY Putative isomerase YbhE 7 118 - -
Lal10g0769 799 MobiDBLite consensus disorder prediction 129 167 - -
Lal10g0769 799 Pfam WD domain, G-beta repeat 208 233 IPR001680 GO:0005515
Lal10g0769 799 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 201 234 - -
Lal10g0769 799 SMART WD40_4 530 565 IPR001680 GO:0005515
Lal10g0769 799 SMART WD40_4 4 43 IPR001680 GO:0005515
Lal10g0769 799 SMART WD40_4 194 233 IPR001680 GO:0005515
Lal10g0769 799 SMART WD40_4 285 324 IPR001680 GO:0005515
Lal10g0769 799 SMART WD40_4 236 282 IPR001680 GO:0005515
Lal10g0769 799 SMART WD40_4 50 96 IPR001680 GO:0005515
Lal10g0769 799 Gene3D - 167 254 IPR015943 GO:0005515
Lal10g0769 799 SUPERFAMILY WD40 repeat-like 173 669 IPR036322 GO:0005515
Lal10g0769 799 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 2 799 IPR044622 GO:0010073|GO:0035266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0769 Lal-Chr10 15423955 15431364 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0769 K14548 - gmx:100797494 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0769 10 15423955 15431364 Lal10g0769 10 15423955 15431364 ECH
Lal8g0685 8 4824043 4830298 Lal10g0769 10 15423955 15431364 LSH