Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0768 ATGGTGTTGTTATCAGACATAAACGACGCGGATGAGCTCGACGAGGAACCTGGCGAGGTGATCGAATCGGCACCGCCTCAAAAGGTTGGCGAAGAGCGACATCTCAGTAACTCTGGTCTAAAAAAGAAGCTTCTAAAACGTGGACATGGATTGGAAACCCCTGATTTCAACGACGAAGTCACTGTTCACTATGTTGGTACATTGCTTGATGGAACAAAGTTCGATTCAACTAGGGATAGAGATCAACCTCTCACATTTACTCTTGGTCAAGCTCAAGTTGCCACTGGATTGGATTATGGGATAATCACCATGAAGAAGGGAGAGGTATCATTGTTTACATTACCGGCTGAGTTGGGTGTTTCATCCAACTCCGACTCAGTTACGCAGTTTGAGGTGGAACTCATTTCGTGGATCAGGGTCATAGATGTATGCAAAGATGGTGGAATTGTGAAGAAAATTTTGGAGAAAGGGACGACGAATGAACGACCCGGTGATCTTGACGAAGTCCTTGTGAATTATAAGGTGGCACTAGTTGATGGCACTGTTATTGCAGAAACACCAGAAGGAGGAGTTCAGTTTCATGTGAAGGATGGTCATCTTTTTCCCAGATTGCCCAAAGTAATCATGTCTATGACAAGAGAAGAGAAGGCTGAATTAATAGTTCAACCCCAGTATGCCTTTGGGGAGAAGGGGAGAGAAGCTAGTGGCGGGCTCCAATCAATCCCTCCAAATTCAGTGGTGCATGTTAATATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTTACTGGTAATTCCATGGTGCTTAAGAAGATTCTGAAAGAAGGAGAAGGTGCTTTCATAGCAAATGAGGGTGCAAAAGTTACTGTCAGATACACAGCAATGCTAGAAGATGGAACTGTGTTTGAGAAAAGAGGAATCGGTGAAACACCTCCCTTGGAATTCATAACTGATGAAGAACAAGTGATTGCTGGTCTAGACCGAGCAGTGGCAACAATGAAGAAGGGTGAGAGGGCCATAATTAGCATACATTCTGATTATGCATTTAGAAATGTTGAAGTGAGACAAGATTTTGTTATTGTGCCATCAGGCTCAAATGTAGTCTATGACACCGAGATGATGGATTTTATTAAGGAGAGAGCACCGTGGGAATTGAGTAGTAATGAGAAAATTGAGGAGGCTGGGAAGAAGAAAGAAGAAGGGAATTTTTTATTTAAAGTGGGCAAGTATCAGCGAGCAGGAAGGAAATATGAAAAGGCTGCTGATTATGTTAGTGAAGATGGATCCTTTGCAGATGATGAGGAAAAACTAGCTAAAGCACTAAGAGTGTCATGCTGGTTGAATGGCGCAGCTTGTAGCCTAAAACTTAGTGATTTTCCTGGAGCAATCAAGTTATGTTCACAGGTACTTGATGTTGAATTTCACAATGTGAAAGCTTTGTATAGACGAGCACAGGCGTACATAGAGACTGGTGACTTTCTTTCGGCAGATGTAGACATCAAGAAAGCCCTCGAGGTGGAACCACAAAACAGGGAGGTAAAGGTAATTCAGAGGAAATGTAAACAACTTCAAGCTGAAAATGACAAAAAAGATGCTAAGCTCTATGGGAATATGTTTGCATATGAAATGAAGGACTCATCTGTGGTAACAAAGAGACTGAAGGCTGAGAAAGAAGAGGATGAGATGAAAAAGGAAGAGGCCATGAGAATGGAAATGGACAAGGTTGCTGATAGTGCAGCTCCTCCTGATGGTGGTTTATTCTAG 1764 0.4246 MVLLSDINDADELDEEPGEVIESAPPQKVGEERHLSNSGLKKKLLKRGHGLETPDFNDEVTVHYVGTLLDGTKFDSTRDRDQPLTFTLGQAQVATGLDYGIITMKKGEVSLFTLPAELGVSSNSDSVTQFEVELISWIRVIDVCKDGGIVKKILEKGTTNERPGDLDEVLVNYKVALVDGTVIAETPEGGVQFHVKDGHLFPRLPKVIMSMTREEKAELIVQPQYAFGEKGREASGGLQSIPPNSVVHVNIELVSFKPVINVTGNSMVLKKILKEGEGAFIANEGAKVTVRYTAMLEDGTVFEKRGIGETPPLEFITDEEQVIAGLDRAVATMKKGERAIISIHSDYAFRNVEVRQDFVIVPSGSNVVYDTEMMDFIKERAPWELSSNEKIEEAGKKKEEGNFLFKVGKYQRAGRKYEKAADYVSEDGSFADDEEKLAKALRVSCWLNGAACSLKLSDFPGAIKLCSQVLDVEFHNVKALYRRAQAYIETGDFLSADVDIKKALEVEPQNREVKVIQRKCKQLQAENDKKDAKLYGNMFAYEMKDSSVVTKRLKAEKEEDEMKKEEAMRMEMDKVADSAAPPDGGLF 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0768 587 SUPERFAMILY TPR-like 389 538 IPR011990 GO:0005515
Lal10g0768 587 Gene3D - 140 256 IPR046357 GO:0003755
Lal10g0768 587 SUPERFAMILY FKBP-like 32 138 - -
Lal10g0768 587 Gene3D - 257 380 IPR046357 GO:0003755
Lal10g0768 587 MobiDBLite consensus disorder prediction 1 20 - -
Lal10g0768 587 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 57 138 IPR001179 GO:0003755
Lal10g0768 587 SMART tpr_5 394 427 IPR019734 GO:0005515
Lal10g0768 587 SMART tpr_5 477 510 IPR019734 GO:0005515
Lal10g0768 587 SMART tpr_5 443 476 IPR019734 GO:0005515
Lal10g0768 587 Coils Coil 513 533 - -
Lal10g0768 587 Gene3D - 33 139 IPR046357 GO:0003755
Lal10g0768 587 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 285 377 IPR001179 GO:0003755
Lal10g0768 587 SUPERFAMILY FKBP-like 142 257 - -
Lal10g0768 587 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 166 257 IPR001179 GO:0003755
Lal10g0768 587 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 163 254 IPR001179 GO:0003755
Lal10g0768 587 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 282 373 IPR001179 GO:0003755
Lal10g0768 587 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 55 125 IPR001179 GO:0003755
Lal10g0768 587 Coils Coil 550 575 - -
Lal10g0768 587 PANTHER PEPTIDYLPROLYL ISOMERASE 3 264 - -
Lal10g0768 587 PANTHER PEPTIDYLPROLYL ISOMERASE 260 373 - -
Lal10g0768 587 PANTHER PEPTIDYLPROLYL ISOMERASE 368 561 - -
Lal10g0768 587 ProSiteProfiles TPR repeat profile. 477 510 IPR019734 GO:0005515
Lal10g0768 587 Gene3D Tetratricopeptide repeat domain 381 537 IPR011990 GO:0005515
Lal10g0768 587 SUPERFAMILY FKBP-like 263 392 - -
Lal10g0768 587 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 260 373 - -
Lal10g0768 587 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 368 561 - -
Lal10g0768 587 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0768 Lal-Chr10 15415128 15422986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0768 28 540 Calmodulin-binding Proteins AT3G25230 54.319 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0768 K09571 - gmx:100798382 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0768 10 15415128 15422986 Lal10g0768 10 15415128 15422986 ECH