Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0764 ATGGCCAATAATTCTCAGCCCCCTGGCATGCAGTTTCGGCCAGTCATTCAATCTCAGCAAGGGCAACCATTTGTTCCAATGACTTCACAACAATTTGGACATGCAGGACATGCTATACCGTCTTCAAATGTTGTTCAAAGTCAGCAAGTGCAGTATTCTCAACCAGTGCAACAGTTGACTCCAAGACCAATTCAGCCCGGTCATCCGGCACCTTTATCCCAGGCTCCTATGCCATATATACAGACAAGTAGGCCACTGACATCTGCTCCACCACATTCACAGCAAATGGTTTCCCACTTAAGCAATCATATGCCTGGCTTGGCTGTGTCAGGAGCACCCCCACATCCTTCATATACTTTCACACCATCTTATGGTCAGCAGCAAGATAATGCTAATGCATTGGCTCAATACCAGCCTCCTCCTCAAATGCTTGCACCTCCTGCTGGACAACCTTGGTTGTCCTCTGTATCTCAGAGTGCTTCTGCTGTTACACCAGTGCAGCAGGGTGGAGTACAGTCATCTGATTCTACATCAACTGATGCAAGAACAGGTGCTCCTAACCAGCAGCAGTCCTTATCTGATTGGCAAGAGCATACTTCTGCTGATGGAAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCTTTGGAATTGATGTCACCTATTGAGCGGGCAGATGCATCAACGGTGTGGAAAGAATTCACTTCTTCAGATGGGAAAAAGTATTATTACAACAAGATTACTCAGCAATCAACATGGTCAATACCAGAGGAACTTAAGTTGGCTCGTGAGCAGGCACAGAAAGCTGTGAACCAGGGAGTCCAGTCAGAAGCAACTGATGCGTCCAATGCTGCTGTCTCCTCTAATGCAACATCAACAGATGCTAATGTAGCTATTTCCAATACTTCTTTGACATCAAATGGGATTGCTTCAAGCCCTGCTTCTCTCCCACCTATAGGAGCAGCTGATCCACAACAGTTGATTTCTGGATCAGGGACCCCTGTTTCCCACTCTATTGTTACTCCTGGCTCCACTGGAGTTGGACAAAGTACTGTTACCATGACAATCACTGAACCTATAACAGTTGCAGGAAGTTCAGGAGCAGCTACAGATTCACTTGAATCCAAAGTGCCATCCATTGTTGAAAAACAAGCATCTGAAGATTTTGCTACTTCCACCACTGGAGCTTCTCTTCAATATATTGAGGAATCCAGAAGAGGAGTGACAGGGGTTGGAAAAATAAATGTGACTCCGCCTGAGGAGAAGGCCAATGATGATGAAACTTTGGTCTATGCGAATAAGCTGGAAGCAAAAACTGCATTTAAAGGGCTATTGGAATCAGCGAATGTTCATTCTGATTGGACATGGGAACAGGCAATGAGAGAAATCATCAATGATAAAAGATATAATGCTCTAAAAACACCCGGTGAACGAAAACAAGCTTTTAATGAGTATTTGGGCCAAAGGAAGAAGATAGAGGCTGAAGAGAGGCGCATGAAGCAGAAAAGAGCTCGAGAAGAATTCACTAAGATGTTGGAAGAGTGCAAAGAACTTACATCATCCATAAGGTGGAGCAAAGCTATAAGTATGTTTGAAAATGATGAACGATTCAACGCTGTTGAAAAACAAAGAGACCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAATTGCTGCAGAGGAACACAGGCAGAATATAGCGGAATACAGGAAATTCTTAGAGTCCTGTGATTATGTGAAGGTGTATAGTCAGTGGCGGAAAGTCCAAGATCGGTTAGAGGATGACGATAGATACTTGAGACTTGAAAAAATTGATCGCTTGCTTGTTTTCCAGGACTATATACGTGACTTGGAGAAGGAAGAAGAGGAGAAAAAAAGAATACAGAAGGATCGAGTCTATCGGGGTGAAAGGAAAAACCGTGATGCATTTTGCAAGTTGCTGGAAGAACATGTTGCTGCTGGAATTCTTACTGCTAAAACTCAATGGAGAGAGTATTGTTTGAAGGTCAGGGATTTGCCTCAATATCAAGCTGTTGCGTCAAATACATCTGGTTCCACTCCAAAAGAAATATTTGAGGATGTTGCTGTAGAACTTGAAAATCAGTATCACGAAGACAAGACACTCGTAAAAGATATAATCAAGACATGCAAGATTACTGTAGTGTCTACATCAGTGTTTGAGGACTTTAAGTCTGCTGTCTTGGACGAAGGTTGCAAAACAGTATCTGACATCAATTTGAAGCTTGTATACGAAGAGTTGCTAGAGAGAGCCAAGGAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTTGCTGATGATTTCACTAACTTGTTATATACATTTAAGGATATCACTACTTCTTCACAATGGGAGGATTGCAAGCCACTCTTTGACGAGACACAAGAGTACAGGTCCATTGGGGATGAAAGCTACAGTAGAGAAATTTTTGAACAGTACATTACATACTTGGAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGATGAAAAGGCTAAAAAAGAGAAAGAAAAAGAAGAGAAAGAAAAACGGAAGGAGAAGGAGAAAAATGAGAAGGATAGAGAACGTGAGAAAGAAAAGTCTAAGGAAAGACATAAGAAGGTTGACACAGATAGTGAAAATCAAGAAATAAGTGACAGCCATGGTTACAAGGAGGAGAAGAAAAAAGAAAAGGATAAGGAAAGGAAACATCGGAAGAGGCGCCAGAGCAGCATAGAGGATGTGGATTCTGAAAAGGATGAGAAGGAAGAGACTAAGAAATCACGAAGACATGGCAGTGACCGCAAGAAGTCTAGGAAGCATGCAAACTCTGAATCAGATAATGAAAGTAGGCATAGAAGACACAAGAGGGACCATCGAGATGGTTCCAGAAAAACTGGGGGAAATGTGGAGCTTGAAGACGGGGAGCTCGGTGATGATGGTGATGTTTAA 2991 0.4259 MANNSQPPGMQFRPVIQSQQGQPFVPMTSQQFGHAGHAIPSSNVVQSQQVQYSQPVQQLTPRPIQPGHPAPLSQAPMPYIQTSRPLTSAPPHSQQMVSHLSNHMPGLAVSGAPPHPSYTFTPSYGQQQDNANALAQYQPPPQMLAPPAGQPWLSSVSQSASAVTPVQQGGVQSSDSTSTDARTGAPNQQQSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGKKYYYNKITQQSTWSIPEELKLAREQAQKAVNQGVQSEATDASNAAVSSNATSTDANVAISNTSLTSNGIASSPASLPPIGAADPQQLISGSGTPVSHSIVTPGSTGVGQSTVTMTITEPITVAGSSGAATDSLESKVPSIVEKQASEDFATSTTGASLQYIEESRRGVTGVGKINVTPPEEKANDDETLVYANKLEAKTAFKGLLESANVHSDWTWEQAMREIINDKRYNALKTPGERKQAFNEYLGQRKKIEAEERRMKQKRAREEFTKMLEECKELTSSIRWSKAISMFENDERFNAVEKQRDREDLFESYMVELERKEKEIAAEEHRQNIAEYRKFLESCDYVKVYSQWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEKKRIQKDRVYRGERKNRDAFCKLLEEHVAAGILTAKTQWREYCLKVRDLPQYQAVASNTSGSTPKEIFEDVAVELENQYHEDKTLVKDIIKTCKITVVSTSVFEDFKSAVLDEGCKTVSDINLKLVYEELLERAKEKEEKEAKKRQRLADDFTNLLYTFKDITTSSQWEDCKPLFDETQEYRSIGDESYSREIFEQYITYLEEKAKEKERKREDEKAKKEKEKEEKEKRKEKEKNEKDREREKEKSKERHKKVDTDSENQEISDSHGYKEEKKKEKDKERKHRKRRQSSIEDVDSEKDEKEETKKSRRHGSDRKKSRKHANSESDNESRHRRHKRDHRDGSRKTGGNVELEDGELGDDGDV 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0764 996 ProSiteProfiles FF domain profile. 506 561 IPR002713 -
Lal10g0764 996 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 6 991 IPR039726 GO:0045292
Lal10g0764 996 Pfam WW domain 236 261 IPR001202 GO:0005515
Lal10g0764 996 Pfam WW domain 193 220 IPR001202 GO:0005515
Lal10g0764 996 Gene3D FF domain 638 719 IPR036517 -
Lal10g0764 996 Gene3D FF domain 570 637 IPR036517 -
Lal10g0764 996 Gene3D FF domain 496 569 IPR036517 -
Lal10g0764 996 MobiDBLite consensus disorder prediction 137 198 - -
Lal10g0764 996 SMART FF_2 780 835 IPR002713 -
Lal10g0764 996 SMART FF_2 574 628 IPR002713 -
Lal10g0764 996 SMART FF_2 506 561 IPR002713 -
Lal10g0764 996 SMART FF_2 439 493 IPR002713 -
Lal10g0764 996 SMART FF_2 648 709 IPR002713 -
Lal10g0764 996 Gene3D FF domain 773 848 IPR036517 -
Lal10g0764 996 SUPERFAMILY FF domain 781 842 IPR036517 -
Lal10g0764 996 Coils Coil 762 786 - -
Lal10g0764 996 ProSiteProfiles WW/rsp5/WWP domain profile. 230 263 IPR001202 GO:0005515
Lal10g0764 996 SUPERFAMILY FF domain 500 568 IPR036517 -
Lal10g0764 996 SUPERFAMILY WW domain 194 228 IPR036020 GO:0005515
Lal10g0764 996 SUPERFAMILY FF domain 641 716 IPR036517 -
Lal10g0764 996 ProSitePatterns WW/rsp5/WWP domain signature. 236 261 IPR001202 GO:0005515
Lal10g0764 996 MobiDBLite consensus disorder prediction 76 101 - -
Lal10g0764 996 CDD WW 236 263 IPR001202 GO:0005515
Lal10g0764 996 Coils Coil 833 885 - -
Lal10g0764 996 MobiDBLite consensus disorder prediction 1 61 - -
Lal10g0764 996 MobiDBLite consensus disorder prediction 1 125 - -
Lal10g0764 996 MobiDBLite consensus disorder prediction 840 996 - -
Lal10g0764 996 Gene3D - 230 288 - -
Lal10g0764 996 Gene3D - 189 229 - -
Lal10g0764 996 ProSiteProfiles FF domain profile. 646 709 IPR002713 -
Lal10g0764 996 Pfam FF domain 577 625 IPR002713 -
Lal10g0764 996 Pfam FF domain 508 558 IPR002713 -
Lal10g0764 996 Pfam FF domain 441 490 IPR002713 -
Lal10g0764 996 Pfam FF domain 650 705 IPR002713 -
Lal10g0764 996 MobiDBLite consensus disorder prediction 919 943 - -
Lal10g0764 996 SUPERFAMILY WW domain 235 268 IPR036020 GO:0005515
Lal10g0764 996 SUPERFAMILY FF domain 566 635 IPR036517 -
Lal10g0764 996 ProSitePatterns WW/rsp5/WWP domain signature. 195 220 IPR001202 GO:0005515
Lal10g0764 996 Coils Coil 622 642 - -
Lal10g0764 996 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 6 991 - -
Lal10g0764 996 MobiDBLite consensus disorder prediction 951 967 - -
Lal10g0764 996 ProSiteProfiles WW/rsp5/WWP domain profile. 193 222 IPR001202 GO:0005515
Lal10g0764 996 SUPERFAMILY FF domain 431 493 IPR036517 -
Lal10g0764 996 SMART ww_5 190 222 IPR001202 GO:0005515
Lal10g0764 996 SMART ww_5 231 263 IPR001202 GO:0005515
Lal10g0764 996 MobiDBLite consensus disorder prediction 151 197 - -
Lal10g0764 996 CDD WW 193 222 IPR001202 GO:0005515
Lal10g0764 996 Gene3D FF domain 439 494 IPR036517 -
Lal10g0764 996 Coils Coil 555 575 - -
Lal10g0764 996 ProSiteProfiles FF domain profile. 574 628 IPR002713 -
Lal10g0764 996 ProSiteProfiles FF domain profile. 439 493 IPR002713 -
Lal10g0764 996 MobiDBLite consensus disorder prediction 840 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0764 Lal-Chr10 15350619 15366700 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0764 K12821 - gmx:100806019 1375.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0764 10 15350619 15366700 Lal10g0764 10 15350619 15366700 ECH