Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0761 ATGAATGATATTAATAGCAACAATGGTGATGGGAGCATTAATAATAACTGGTTGGGATTCTCTCTCATGAAAATGGAACCTCCCCACCACCATCATCATCATCATCATCATCATCATCATGATCAAGTTCAAGAGCATCATCACTTTTATCATAACTCTCAGCAAGATTCTGCTATTTCCAACACTAGTGTTCCTACAAGCTTCTACTGGGAAAACAGTGATTTTCATTCTCTTCCTTTGTCTATGATGCCTCTCAAATCTGATGGGTCACTTTGCATTTTGGAACCTCACACCAGATCACAAACACAAGATTTCCTAGGTGGTGCAACTATGGGAAGTGACCAATATGGAGGTTCTGAAAGAGAAGCAATGGCTCTAAGTCTAGACAGCATTTACTATAACCAAAATGCTCATGAGTCTCAAACAAATAGAGACCTTCTTTCTGACCCTTTCAGGCAACAACACTCATATTATTCAGGATTTGCTTGCAATGGGATTTACCAAGCACCATTGGTGGAACAAGAAACCAAACAAATACCTCAGGTGGGAAATGAAGGCATTGCTTGTTTCAAAAGCTGGGAGAATCAACTGAATAATCATAATACTACTACTACTAGTATTGGAGATGATGTTGGTGCTTCAGGTTCAAGGTTTGGTGGTGTTGGCAGAGTTAGTAGTGTACAACATTGTGGAAATTTACAGGCTCTAAGCCTTTCTATGAGTCCTGGTTCTCAGTCAAGCTGTGTCACTATTCCTTCTGGTACTACTACTACTGATTCAGTGGCCATTGAAACCAAAAAAAGAGGGTCTGCAAAGCTTGGCCAAAAGCAACCAGTGCATAGGAAATCTATTGATACATTTGGCCAGAGAACTTCACAGTATAGAGGTGTAACAAGGCATAGATGGACTGGTAGATATGAAGCACATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAAACCAGGAAAGGAAGACAAGGTGGTTATGATATGGAAGAAAAAGCTGCAAGAGCTTATGATCTTGCAGCACTTAAGTATTGGGGATCTTCAACACATATAAACTTCCCGCTAGAAAATTATCAAATGCAACTTGAAGAAATGAAAAATATGAGTAGACAGGAATATGTTGCACACTTGAGAAGAAAGAGCAGTGGTTTTTCTAGGGGTGCTTCAATCTATAGAGGGGTTACAAGGCACCACCAACATGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCAGGGAATAAGGACCTTTATCTTGGGACATTCAGTACACAAGAGGAAGCAGCTGAAGCATATGATGTAGCTGCAATCAAATTCCGCGGCGTAAATGCCGTGACTAACTTCGACATATCTAGATACCATGTTGAAAACATCATGGCCAGTAATACCCTACTTGCTGGAGATCAAGCAAGGAAAAACACCAAAGAGAGTGAACCAAGAACTAAGGCAATTGAGTATAATGTTCTATCCAACCATATCATTAACAATGAAGAAGTTGAAGCTGAAAACAACAACAACAACAAAAACAACAACAATGAAACTAATGTTACAGATTGGAAGATGGCATTATATCATCAATCACCACAACAGCAACAACAATCAAATTCAAATAGCTATGTCCAGAAATCAATGAACTGTGGGAATTATAGAAACCATGCTTTTTCTGTGTCCCTACATGATCTCATAGGATCTAGCCAACAAACTACTATGCTAGATCATGACTCTACTACTAAACTAGGGACACATTTTTCAGACCAGTCCACTCTTGAGGCCAGTTTAAGCAGCACAAGAGAATGCAGTTCTGATAAAACATGTCCTACAATGTTATTTCCAAAACCTCCAATAGGGTCAACAAAGATTGTTAGCCCTATTGCTACTACTGGTTGGTTTCCCTCACCAGCTATCTCAATGTCTCAGTTGCCAGTTTTTGCTGCTTGGAATGATGCCTAG 1953 0.3984 MNDINSNNGDGSINNNWLGFSLMKMEPPHHHHHHHHHHHHDQVQEHHHFYHNSQQDSAISNTSVPTSFYWENSDFHSLPLSMMPLKSDGSLCILEPHTRSQTQDFLGGATMGSDQYGGSEREAMALSLDSIYYNQNAHESQTNRDLLSDPFRQQHSYYSGFACNGIYQAPLVEQETKQIPQVGNEGIACFKSWENQLNNHNTTTTSIGDDVGASGSRFGGVGRVSSVQHCGNLQALSLSMSPGSQSSCVTIPSGTTTTDSVAIETKKRGSAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGSSTHINFPLENYQMQLEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYHVENIMASNTLLAGDQARKNTKESEPRTKAIEYNVLSNHIINNEEVEAENNNNNKNNNNETNVTDWKMALYHQSPQQQQQSNSNSYVQKSMNCGNYRNHAFSVSLHDLIGSSQQTTMLDHDSTTKLGTHFSDQSTLEASLSSTRECSSDKTCPTMLFPKPPIGSTKIVSPIATTGWFPSPAISMSQLPVFAAWNDA 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0761 650 Pfam AP2 domain 293 348 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 Pfam AP2 domain 392 442 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 MobiDBLite consensus disorder prediction 27 47 - -
Lal10g0761 650 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 14 648 - -
Lal10g0761 650 Gene3D AP2/ERF domain 292 358 IPR036955 GO:0003700|GO:0006355
Lal10g0761 650 Gene3D AP2/ERF domain 392 452 IPR036955 GO:0003700|GO:0006355
Lal10g0761 650 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 648 - -
Lal10g0761 650 SMART rav1_2 293 362 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 SMART rav1_2 392 456 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 Coils Coil 497 517 - -
Lal10g0761 650 PRINTS Ethylene responsive element binding protein signature 294 305 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 PRINTS Ethylene responsive element binding protein signature 432 452 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 CDD AP2 391 452 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 ProSiteProfiles AP2/ERF domain profile. 293 356 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 ProSiteProfiles AP2/ERF domain profile. 392 450 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 SUPERFAMILY DNA-binding domain 292 358 IPR016177 GO:0003677
Lal10g0761 650 CDD AP2 292 356 IPR001471 GO:0003700|GO:0006355
Lal10g0761 650 MobiDBLite consensus disorder prediction 27 44 - -
Lal10g0761 650 SUPERFAMILY DNA-binding domain 391 452 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0761 Lal-Chr10 15309532 15313287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0761 80 474 AP2-EREBP Transcription Factor Family AT4G37750 55.479 1.41e-142 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Lal10g0761 AP2 8.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0761 K09285 - gmx:100798179 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0761 10 15309532 15313287 Lal10g0761 10 15309532 15313287 ECH
Lal8g0851 8 6173734 6178147 Lal10g0761 10 15309532 15313287 LSH
Lal10g0761 10 15309532 15313287 Lal21g0252 21 1656702 1661389 PCT
Lal10g0761 10 15309532 15313287 Lal4g0158 4 984112 988655 PCT
Lal21g0252 21 1656702 1661389 Lal10g0761 10 15309532 15313287 PCT
Lal4g0158 4 984112 988655 Lal10g0761 10 15309532 15313287 PCT