Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0751 ATGAAGATGTTCAGTGCTTGCTGCTTCACAAACAAAATCTCCAAGTTTCTTTCTCACAAGAAGCACAAGAAATCTCAGCCTCAGATCATAGCGGGAAACATCTCTGGTTCAAGTAGGAGCATGGCTACTAATGTTTTACTTAATCACGACTTCTCTGGAGGGCTGAACTCTTGGCGTCTCAATTGCTGCAATGGCTATGTAATTTCAGCTGAAGCAGGTTCTCACAAAGGAGTTGGTTCGGATAGTAATTATGCTGTTATCACCGACCGAAAGGAATGCTGGCAAGGTCTCGAGCAAGATATTACGGACAGAATTTCCATTGGTTCTACTTACACGGTTTCAGCTTCTGTTGGAGTATCTGGTCTGTCTCAGGGATCTGCTGATGTTATTGCTACTGTGAAACTTGAATATAATGATAAACCCACTAGTTACTTGTTCATCGGAAGAACATCTGTTGTAAAGGATAGCTGGGAAAAGTTGGAAGGGACATTTTCTTTGTCAACTGTGGCTGATCGGGTTATATTTTATTTGGAAGGACCTGCTTCTGGAGTTGACCTGCTTATACGATTAGTAGAGATCAACTCTTCTAGTCCAGATGATAATGCCACAAGCATAGGATGTGTTTCCACCGTAGATGACAACATTATAATAAACCCACAATTTGAGGATGGCCTGAATAATTGGTCTGGAAGAGGCTGCAAGATTCTGTTGCATGACTCCATGGGAGATGGGAAAATTCTCCCTCAGTCTGGGAAAGGTTTTGCATCTGCAACAGAACGCACACAAAGCTGGAACGGGATTCAGCAGGAGATCACTGCACGAGTGCAGCGCAAGCTTGCCTATGAGGTCACTGCTTTAGTTCGAATATTTGGCAACAATGTCACTACTTCTGATGTTCGAGCTACTTTGTGGGTCCAAACACCCGACCTCCGAGAGCAGTATATAGGCATTGCTAATGTGCAGGCAACAGATAAAGATTGGATTAATATGCAAGGAAAATTCCTTCTAAATGGTTCCCCATCAAAAGTTGTCATTTATTTAGAAGGTCCCCCTCCAGGCACTGACATTCTTGTCAATACTTTGTCTATAAAGCATGCAGCTAAAACACCTCCTTCAACACAACCAGATGTAAAGAACGTTGCTTTTGGGGTTAATGTAATTGAAAACAGCAGTTTGGCTGATGGCAATAATGGATGGTTCCCCCTTGGTAATTGCACTTTAAGCGTTAGAACTGGTTCACCACATATAATTCCACCACTGGCAAGAGATTCTCTCGGGCCTCATGAACTCCTAAGTGGGCGCTACATCCTTGTAACCAATCGCACACAAACATGGAATGGTCCTGCTCAGACAATCACTGAGAAACTGAAGCTCTTTTTGACTTATCAAGTGTCAGCTTGGGTCCGGATTGGTTCAGGATCAAATGGGCCACAGAATGTGAACGTAGCCCTTAGTGTTGACAACCAGTGGGTCAATGGAGGACAAACTGAGGTTTCTGATGATAGGTGGCATGAAATTGGTGGGTCCTTTAGAATTGAAAAGCAGCCATCAAAGGTTATGGTTTATGTCCAAGGTCCCGCTGCTGGTGTAGACTTGATGGTTGCTGGACTTCAAATTTTTCCTGTTGATAGACATGCAAGGTTTAGATATTTAAAGATGCAGACAGACAAGATCCGCAAGCGTGATGTTATCATGAAATTCCCTGGGCTGGATTCTAGCAGCTACCCCAAAACCTCGGTGCAAGTTAGACAAATACGAAACGATTTCCCAATTGGAACATGTATCAGTAGAACAAATATTGACAATGAAGATTTTGTTAACTTTGTGGCAAAACATTTTAACTGGGCTGTGTTTGGCAATGAGTTGAAGTGGTATTGGACTGAGCCACAACAAGGGAATTTCAATTACAGGGATGCTGATGATCTGTTAAACCTGTGTCATAAAAACAACATACAAACTCGTGGTCATTGTATCTTCTGGGATGTAGATGATACTGTTCAGCAATGGATTAAATCACTGAACAAAAATGATTTGATGACGGCTGTCCAAAATCGCTTAACTGGCCTGCTGACTCGCTACAAGGGCAAGTTCAGTCACTATGATGTCAACAATGAAATGCTGCATGGTTCATTTTACCCAGATAGACTCGGCAAGGATGTCAGGGTCAACATGTTCAAGACTGCAAACCAGCTAGACCCATCAGCTACTCTTTTTGTGAATGATTATCATGTTGAAGATGGATGTGACACCAGATCATGTCCAGAAAAATACATTCAACATATTCTTGATTTGCAAGAGCAAGGCGCGCCCGTTGGGGGAATTGGAATTCAAGGCCACATAGACGCTCCAGTGGGGCCTATAGTTTGTTCTGCCCTTGATAAATTGGGTATTCTTGGTCTACCTATCTGGTTTACGGAGCTTGACGTATCTGCTGTTAACGAATATGTCAGAGCAGATGATCTGGAAGTTATGCTAAGGGAAGCTTTGGCTCACCCTGCTGTTGAAGGTATAATGCTTTGGGGTTTTTGGGAGTTGTTTATGAGCAGGGACAATGCACACTTGGTTAATGCAGAAGGTGACATCAATGAAGCTGGGAGTAGATTCCTAGCTCTTAAACAAGAGTGGTTGTCTCACAAACATGGTAATGTTGATGAGCAAGGTCAATTCAACTTCAGAGGCTTTCATGGAACATACAATGTGCAAGTTGTGACTGATACAAAGAAAATTTCTAAGACATTTGTTCTTGACAAGGGTGATTCTCCACTGGTGATATCCATTGATATATAA 2787 0.4248 MKMFSACCFTNKISKFLSHKKHKKSQPQIIAGNISGSSRSMATNVLLNHDFSGGLNSWRLNCCNGYVISAEAGSHKGVGSDSNYAVITDRKECWQGLEQDITDRISIGSTYTVSASVGVSGLSQGSADVIATVKLEYNDKPTSYLFIGRTSVVKDSWEKLEGTFSLSTVADRVIFYLEGPASGVDLLIRLVEINSSSPDDNATSIGCVSTVDDNIIINPQFEDGLNNWSGRGCKILLHDSMGDGKILPQSGKGFASATERTQSWNGIQQEITARVQRKLAYEVTALVRIFGNNVTTSDVRATLWVQTPDLREQYIGIANVQATDKDWINMQGKFLLNGSPSKVVIYLEGPPPGTDILVNTLSIKHAAKTPPSTQPDVKNVAFGVNVIENSSLADGNNGWFPLGNCTLSVRTGSPHIIPPLARDSLGPHELLSGRYILVTNRTQTWNGPAQTITEKLKLFLTYQVSAWVRIGSGSNGPQNVNVALSVDNQWVNGGQTEVSDDRWHEIGGSFRIEKQPSKVMVYVQGPAAGVDLMVAGLQIFPVDRHARFRYLKMQTDKIRKRDVIMKFPGLDSSSYPKTSVQVRQIRNDFPIGTCISRTNIDNEDFVNFVAKHFNWAVFGNELKWYWTEPQQGNFNYRDADDLLNLCHKNNIQTRGHCIFWDVDDTVQQWIKSLNKNDLMTAVQNRLTGLLTRYKGKFSHYDVNNEMLHGSFYPDRLGKDVRVNMFKTANQLDPSATLFVNDYHVEDGCDTRSCPEKYIQHILDLQEQGAPVGGIGIQGHIDAPVGPIVCSALDKLGILGLPIWFTELDVSAVNEYVRADDLEVMLREALAHPAVEGIMLWGFWELFMSRDNAHLVNAEGDINEAGSRFLALKQEWLSHKHGNVDEQGQFNFRGFHGTYNVQVVTDTKKISKTFVLDKGDSPLVISIDI 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0751 928 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 576 871 IPR001000 GO:0004553|GO:0005975
Lal10g0751 928 SMART glyco_10 622 872 IPR001000 GO:0004553|GO:0005975
Lal10g0751 928 SUPERFAMILY Galactose-binding domain-like 212 366 IPR008979 -
Lal10g0751 928 SUPERFAMILY (Trans)glycosidases 576 879 IPR017853 -
Lal10g0751 928 SUPERFAMILY Galactose-binding domain-like 383 543 IPR008979 -
Lal10g0751 928 Pfam Glycosyl hydrolase family 10 585 842 IPR001000 GO:0004553|GO:0005975
Lal10g0751 928 Gene3D - 381 540 - -
Lal10g0751 928 Gene3D - 209 366 - -
Lal10g0751 928 Gene3D - 38 195 - -
Lal10g0751 928 SUPERFAMILY Galactose-binding domain-like 43 194 IPR008979 -
Lal10g0751 928 Gene3D Glycosidases 576 882 - -
Lal10g0751 928 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 43 195 - -
Lal10g0751 928 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 203 928 - -
Lal10g0751 928 Pfam Carbohydrate binding domain 44 182 IPR003305 GO:0016798
Lal10g0751 928 Pfam Carbohydrate binding domain 385 527 IPR003305 GO:0016798
Lal10g0751 928 Pfam Carbohydrate binding domain 213 350 IPR003305 GO:0016798
Lal10g0751 928 PANTHER GLYCOSYL HYDROLASE 43 195 IPR044846 GO:0004553|GO:0005975
Lal10g0751 928 PANTHER GLYCOSYL HYDROLASE 203 928 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0751 Lal-Chr10 15173464 15179511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0751 1 928 Glycoside Hydrolase AT1G58370 67.019 0.0 1334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0751 - - lja:Lj0g3v0316669.1 1627.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0751 10 15173464 15179511 Lal10g0751 10 15173464 15179511 ECH
Lal10g0751 10 15173464 15179511 Lal17g0144 17 888444 898037 PCT
Lal17g0144 17 888444 898037 Lal10g0751 10 15173464 15179511 PCT