Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0746 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTTCTCAAGGTTCCTGAAATCGAACAGAAGGTGCTGGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTTCTGCACTGGCAGAAATTGCACAGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACACGACTGAGTGAAACTGGAAAGGATTGGCGTTATGTATACAAGGCATTAGCTGTTATAGAGTATTTGATATCACATGGATCTGAACGAGCAGTTGATGACATTATTGAACATACTTTTCAGATCTCAGCACTTTCAAGTTTTGAGTATGTTGAGCCTAATGGGAAGGATGTCGGACTCAATGTCAGGAAGAAGTCAGAAAACATTGTGGCCCTTTTAAATGATAGAGATAAGATACAAGAAGTCAGAAATAAAGCTGCTTCAAACCGTGACAAGTTCATTGGAGTTTCATCTAGTGGCATCACGTACAAGTCTGGATCAGCCTCATTTAGTAGTGGAAGCTTTCAGAGCAATAATAAATATGGAGGCTTTGGATCAAGAGATGATGACAGGTTTAGAGATAGCTATAGAGACAAGGGGAACTATGAAGAAGAAAAGGTTGAGAAAGATCAAGAGAACTCCTTCAAAAAGCGTTCTGTGCGGTCTGCCAGCAAAAGTCAAGAGAAGATGTCATCCGGAGTATCAAAATCATCTACTAATGCAGATGTATATGATAGCTATAATTCAGTTCCTCCTGACAGTGCAAGAGCAGGTGAAAACAATGCTGAAGATGACTTTGATGATTTTGATCCAAGAGGAACTTCTACCAAGGCTTCAGCTGGAATCAATAACCAGGTTGATCTCTTTGGACAAGATTTAATTGGTGACCTCATGGATGCTCCAATTCCTATTCCCACAGAAAAGCCTGCAACTAGTGGTGTGTCAGAGGTTGATCTCTTTGCAGATGCAGCATTTGTATCAGCTACACCTCATGTGGACAAGGGGGCTAGTTCTCAAACACAGGATGAAGTGGATCTATTTTCTTCCCAACCAGCCCTTCCTTCCATTACACCAACAGTTGACTTGTTTTCCATTCCTGAGCCAGTTGTGCAGTCAGAAAGCAAGTCAGGAAACTCTGGTGCTATGAATAACAGCAATTTTGATCCCTTTGCTGCTGTTCCACTTAATAATTTTGATGGGTCTGATATGTTCAGTGAATTTACTTCTCAATCTGATTCAGTGTCATCGCAGCCCTCACAGCCTGCAAATAATGTTGTCAGTGATATGTTTGGTGAATTTACTTCTCAATCTGATTCAGTATCATCGCAGCCTACAAATAATGTTGTCAGCGATGCCAGCCAGGATAACACGAATGGTAAATCTTTAGGGGACTCTAAAGTTACACCTAAAAAGGATAGTTTCCAAGTGAAGTCTGGTGTTTGGGCTGATTCACTAAGCCGTGGATTGATTGATCTCAATATATCTACTCCGAAAAAAGTAAACCTAGCAGATGTCGGCATTGTGGGCGGATTAAGCGATGGATTAGATGAAAGGGAGAAAGGCACTCCACCTACATTTTACATGGGGAGAGCTATGGGTTCAGGATCTGGCCTTGGTAGATCTGGATTCACTCCTTCACAGCCAGGAACCGGTGACGACTTATTCTCAAGCCTCGGAAGCCAACCATATCAATATGGTGGGTTCCAAAAGTAA 1740 0.4178 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSALAEIAQATKKFTECQMVMNVLWTRLSETGKDWRYVYKALAVIEYLISHGSERAVDDIIEHTFQISALSSFEYVEPNGKDVGLNVRKKSENIVALLNDRDKIQEVRNKAASNRDKFIGVSSSGITYKSGSASFSSGSFQSNNKYGGFGSRDDDRFRDSYRDKGNYEEEKVEKDQENSFKKRSVRSASKSQEKMSSGVSKSSTNADVYDSYNSVPPDSARAGENNAEDDFDDFDPRGTSTKASAGINNQVDLFGQDLIGDLMDAPIPIPTEKPATSGVSEVDLFADAAFVSATPHVDKGASSQTQDEVDLFSSQPALPSITPTVDLFSIPEPVVQSESKSGNSGAMNNSNFDPFAAVPLNNFDGSDMFSEFTSQSDSVSSQPSQPANNVVSDMFGEFTSQSDSVSSQPTNNVVSDASQDNTNGKSLGDSKVTPKKDSFQVKSGVWADSLSRGLIDLNISTPKKVNLADVGIVGGLSDGLDEREKGTPPTFYMGRAMGSGSGLGRSGFTPSQPGTGDDLFSSLGSQPYQYGGFQK 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0746 579 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Lal10g0746 579 Pfam ENTH domain 27 147 IPR013809 -
Lal10g0746 579 PANTHER EPSIN/ENT-RELATED 1 570 - -
Lal10g0746 579 MobiDBLite consensus disorder prediction 548 579 - -
Lal10g0746 579 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 570 IPR033521 GO:0006623|GO:0030276
Lal10g0746 579 MobiDBLite consensus disorder prediction 193 233 - -
Lal10g0746 579 MobiDBLite consensus disorder prediction 189 288 - -
Lal10g0746 579 MobiDBLite consensus disorder prediction 413 473 - -
Lal10g0746 579 Gene3D - 24 164 IPR008942 -
Lal10g0746 579 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Lal10g0746 579 MobiDBLite consensus disorder prediction 524 579 - -
Lal10g0746 579 MobiDBLite consensus disorder prediction 267 281 - -
Lal10g0746 579 MobiDBLite consensus disorder prediction 413 479 - -
Lal10g0746 579 SMART enth_2 26 152 IPR013809 -
Lal10g0746 579 CDD ENTH 28 144 - -
Lal10g0746 579 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0746 Lal-Chr10 15160877 15168427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0746 K12471 - gmx:100809198 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0746 10 15160877 15168427 Lal10g0746 10 15160877 15168427 ECH
Lal8g0703 8 4996603 5004121 Lal10g0746 10 15160877 15168427 LSH