Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1344 ATGCCTCTCTTCCTCTCCGACGAGGAGTTCGCGTGGTGCTCCGGTGACGGCTCTGCCGTGGCCGCGAAGGCCGACGCCTTCATCCGCGGCCTCTTCAACGAGCTCGACACCGTCCGCTCCAAGGCCCACGCCGCCGACATCAACGCCGAGCAGAACTGCCTTCTCATCGAGCAGAAGTATCTCTCCCTCACCGCCGAGTTCTCCAAACTCGAGTCGAACATCGCCGAACTTCAATCCTCTCTCGATCAGCGCCTCCGCGAAATCGACGAGGTGCAATCGCAGAACCACCGAATCAAATTGGAAGCGGTTGAGAAAGATAGGGAGATAGAGCGGTTGAGGACGGAGGTGGCGGAGTTGCACAAGTCGAAGAGGCAGTTGCTTGAGTTGAACGAGCAGAAGGATTTGGAGCTAAGTGAGAAGAATGCAACCATGAAGAGTTATCTTGATAAGATTGTTCGTTTAAGTGAAAATGCTGCTCATAAGGAGGCACGGTTGAGTGAAGTTGAGGCAGAATTGGCACTGTGCCGGGCTGCTTGCACTCGCTTTGAACAGGAGAAGGAGATTGTTGAGAGGCAGAATTCGTGGCTCAACGAGGAGTTGAATGCTAAAGTTAACATTGTTTTTGAGCTGCGCAGAAAGCACACTGAATTTGAAGCTGATATGACCTCCAAACTTGCAGATATGCAGAGGCAGTTTGGTGAAAGTTCTAAATCTCTACTGTGGAATGAGGATAGAGTGAGGGAGCTTGAAATTAAGCTTAAATCTGTGCAGGAGGAATTAATTTCTGCTAAAGATGTTGCTGCAGCGAACGAAGAACAATTATCTGCTGAACTTTCCACTGTTAATAAGCTTAATGAGCTATATAAAGAGAGTTCCGAGGAATGGTCAAAAAAAGCAGCAGACCTAGAGGGTGTGATAAAAGCAATAGAGTCACGCCTAAAGCAAGTTGAAGATGATTATAAAGAGAAACTTGAGAAGGAATTATCTGCCAGAAAACAAGTTGAAAAGGAGGCCACTGATTTAAAAGAAAAGCTTGAGAAGTGTGAAGCTGAAATTGAGACAAGGAAGAAGACTGATGGAGTGAATAATCTTCCTCTTAGCAGTTTTGCTACTGAACCGTGGATGGAACCAATTGAAGCTGATACCATGGTTGAGGAAAATAGCTTGCTACTAGTCCCAAGAATTCCTGTTGGAGTTTCTGGAACTGCATTGGCTGCTTCACTTCTGCGAGATGGGTGGAGTTTGGCCAAAATGTATGCAAAATATCAAGAGGCAATTGATGCATTGAGGCACGAACAATTGGGAAGGAAGGAGTCAGAAGCAGTACTGCAACGGGTTCTATACGAGTTAGAGGAGAAAGCGGAAGCAATTATAGATGAAAGAGTGGAACATGAAAAAATGGCTGACTCATACTCCTTGATGAACCAAAAATTGCGAAAATCCCTGAATGAAAATTCCAACTTAGAGAAAACCATCCAGGAACTGAAGGCTGATCTGAAAAGGCATGAACGGGATTATAATCTTGTCCAGAAAGAAACTGATGACCTTCGAAAACAGGTGACAGTACTTCTGAAGGAATGCCGAGACATACAACTTCGTTGTGGCTCAATGGGATATGATATTGTTGATGATGCTTCAAATATTGTTTCAAGGACAAGTACAGAGACTGAAGCTGAACATGTCATATCCGAGCACCTCTTGACCTTCAAGGACATCAACGGACTAGTTGAGCAGAATGTTCAACTTAGAAGCCTTGTACGTAGCATTTCTGGCCATATTGAAAATCAGGAGGTGGAATTCAAGGAGAAGCTTGAAATGGAACTCAAAAAGCATACTGAAGAATCTGCTTCAAAAGTTGCAGCTGTTCTGCAGAGAGCAGAAGAGCAAGGCCACATGATTGAAGCGCTTCATGCATCTGTTGCGATGTATAAGAGGTTATATGAGGAGGAGCATAATCTTCATTTATCTCATACCCATTCCTCAGAAGCTCTTGCAGCTGTTGCGGAAGTTGGAAGAAACAACCTTAAGACTTCAATTGAAAGTTCACAGGAGGCTGCTAAGAAGTCCCTTGAAAAAGCTGCTGAGCGTGTGAGATGCCTTGAGGATGATTTAGCGAAGTCTAGGAGTGAGATTATTGTATTACGATCAGAACGTGACAAGAGTGCACTTGAAGCAAATTTTGCTAGAGAGAAACTTAATGACATTATGAAAGAATTTGAACATCAGAAAACTGAAGCCAAAGGCATTTTAGAAAGAAATGTTGAGTTTTCTCAGCTGGTTGTTGACTACCAACGAAAATTGCGTGAAAGCTCTGAGTCATTGATTGCTGCTGAGGAGCTTTCGCGGAAACTTACTTTGGAGCTGTCAGTTTTAAAGCAAGAAAAGGAAGTCATATCAAATTCTGAAAAAAGAGCATCCAATGAAGTTCGCAGTTTGTCTGAAAGGGTGCAGCGTTTGCAGGCTAGTTTGAGTACCATACAGAGTACTGAGGAAGTTCGAGGGGAAGCAAGAGCTGCAGAGAGGGTTAAGCAAGAAGAATATATAAAGAAATTGGAGAGGGAATGGGCTGAGGCCAAGCAAGAGTTAAATGAAGAGCGGGAAAATGTGCGGAGATTCACATCAGATCGGGACCAGACCCTAAAAAATTCTCTGAGACAGGTTGAGGATATGAGCAAAGAGTTAGCTAATGCATTGCGTGCAGTTGCATCTGCTGAATCAAGGGCTGCTGTGGCTGAGGTAAAACTCTCTGGTCTTCAAAGAAAGATGGGTTCCACGGATGACAAGCTTGTCGAAATAGGTGGAGTGAGTGGACCTTCCACTTTATCAAGTGATGAGGTTGTTGCTGAATTGCAAAAGGCAAAGGACGAAATTGAAAAGTGGAAAGAGGAAGCTCATGCCAACAAAGCCCACATGCTGCAGTATAAGAGCATTGCTGAGGTGAATGAAGATGCACTGAAAGAGATAGAAAAGGCGCATGAGAAGTTTAAAATAGAGGCTGACAATGGAAAGAAAGATCTGGAATCTGAACTTAAGTCACTAAGAGACAAGATGTTAGAGCTTGAAAATAAATCTTCTTTGAAATATGAAGAAGTTGCTTCTGAAACTGTGGGAAAGGAAGAGGCTCTTACATCTGCTATGGCTGAAATCACAAATCTTAAAGAAGAAATTTTAACCAAATCTTCTCAAATTTCTGCAATGGAAATTCAGATCTCGGGTTTAAAAGAAAAACTGGACAGGGAACATCAGAAATGGCGGGCAGCTCAAACCAATTATGAAAGACAGGTTGTTCTCCAGTCCGAAACTATTCAGGAGTTGACAAAAACATCTGAAGCACTAGCCTTGCTGCAGGAGGAGGCATCTGAGTTACGGAAACTAGCCAATACTCAGAAAATTGAAAATAATGAACTAAAGGCTAAGTGGGAAGATGAGAAGGTACAACTAGAGAAGTCTAGGAATGATGCTGAGAAGAAATACAATGAAATCAATGAACAGAATAAAATACTACATAGTCAACTTGAGGCTTTTCATATTCAATGGGCCGAGAAGGAGCGTAACGCTGCTGGTATTTCATCTGGAAGTAGTAGTGCAGATGCCTTTGGTGATGCTGGTCTTCAAAACGTGATTAATTATCTCAGACGTTCCAAAGAAATTGCAGAAACAGAAGTTTCATTGTTAAAACAAGAGAAGCTGCGACTACAGTCACAGCATGAGAGTGCTTTGAAGGCAGCAGAGTCTGCACATGCATCACTAGAAACTGAGCGTGCAAAATCAAGATCATTTTTGTTTACCGAAGAGGAGTTCAAAGCATTGCAGCTTCAGGTCAGAGAATTGAACTTACTTCGTGAGAGTAACATGCAGCTCAGGGAAGAAAATAAACACAATTTTGAGGAATGTCAGAAATTGCGTGAACTAGCACAAAAGGTTAGAGCTGAGACAGAGAACCTAGAGAATCTCCTGAGGGAAAGAGAAATTGAGCTTCAGCGCCATAAGAAAGAAATTGGAACATTAAAAATGGAAAAAGATAATCTCAATAAGAAGGTTTCTGAGTTGCTTGAAAGGAGTAAAAATGTTGATGTTGAGGATTATGATCGAGTGAAGAAACTTGCTAGAGAAATCCAGGATAAACTAAGAGAGAGAGATGCTCGGATTGAGGAACTTGGTAAAAGTCTATCAGAAAAGCAGGATTCTGTTTCATGCCTAGAGAAAGATCTTTCAAACTGCCGATTGGAGCTAGCAGAGAGAGAGAAGAGAATTAATGACATTCTGCATAATGAGGCTAACCTAAAACTTGATTCGGAGAAGCATAGGAAACTGCTGGCTCAGTTTAAGAGGATTGATGTTTTGTCAAGGGAAAAGGAAGACCTAGGGAAAGAGAACCAACAACTTTCTAGGCAATTAGATGAAATTAAACAAGGGAAAAGGTCAACATGTGATACAACAGGTGAACAAGCGATGAAGGAGGAAAAGGACACAAGAATACAGATTCTGGAGAAACATCTGGAGAGACAGAGAGATGAATTAAAGAAGGAGAAGGAAGAGAGTCGTTTAGAGAGAAGTAGACGACTGAAGACTGAAAAGGCCATAAAGGACTCTTACAACAATGTTGAACAGGAGAAAATAAAATTGATTATTGAAATTGAGAGGTATAAGGAGTCTCTGAAAAGGTTATCTGATGAAGTTGAAAAGCTTAAGATTGTTATTGGCAATCTTCCTGAGGGTTCAAATGTGGTTCAACTTCTTTCTGGATCCAATGTCGATGACTTTGCTGCTCCTTACATATCTGCTGTGGAAAGTTTTGAAAAGGAAGCTCAGTCAGTATTTCGGGAGCTTGGAGGTCGCGGTAATCTTGGAGATGCAGCAACAATTACGGATGGTTCAGCCGCTGCTACAGGTTCTCTTGTACATCCTCAATCCCAAGGCATTGCATCTTTAGCGGCCCCTGGAGTTAGCGGTTTACCACCTAAAGCCACTGGAGAAAGTGAGAAAAGACTTGCATTACCCAAAGCTAGTGTTGAAACTCGTCGAACAGGTAGGAGATTGGTCAGGCCTAAACTACTAGAGAAAAGTGAGAAAAGACCTGAGGAGCTTCAAGGTGGTGACACAGAAATGTCTGATGCTGAAGGACCTGGGGGCAAGCCTGGGCAGTCTAGTGACACAGATACTAGTAATGTTGTTCAATCATCTCAACAATTGGCTCGTAAGCGTGTTGCTCCTACCTCCACTTCTGAATTACGTGAAGAATCAGTTGCACCTGGTGAGAAGAGCTCTGATGTCTTGAAGAAGTCAAAAGGATCTGAGTCCCTAGAAGAGAATACAGAAGAACAACCTGCTGCAATTCTAGAATTTACTGGCAGCCACCCTGTCACTGAAGAATTATTTGATAGCAGTGACATGCCCCAATGCCAAAATGAGGAGGTTGGTGAAGCTCAAAATGAAGATGGTGAAATTGCTGTCGGGAATGATGAGGAATCCAAAGATCCACGGCACTTGGATGGTACTGGTCAAGAGGAATTACAAGCTGACAAAACTGGAACTTTAGAAGAGAATCAAGATCAATCTGCTGAAACAAAAGTGCTGTCTGATGAGATGCAGAGGAATCAGACAGACCCAGACAATCAGCAGTCAACATTGGCGCCCAGTGGTGAGAGAGAAGAGGGAGAATTGATGCCAGATACTGGAGATCTAGAGGGTGCTAGTGATTTGTCTAACATTGCGGAAAACCAAGAATCTCGGGAAGGTCAATCTGAGTCTGCTGCAACTCCTGAACGTTCCCCAGCTAGGGTTGATGATGATGCTCTAGAGGCTGGTGAGATTAATTCTCCTGAGCTTTCAAGTGATGATAAGAATGATGAGGGTGACTTGGTAGAGGAGGCTGCTGATGGTTCTGACAAGTTGATTGATGTCAACGAACCAATATCAGCTGAGAGCGATCAAGTGGCTGAGCCTGTTGCGAGTGAGACTGCTACTTCGACAAGCACTGTTGCAGAGAGTAGCTCCTCTAAAGTGAACTTACCTGTTCCAAGGCAAGGGACCCCTAGTGCCCCCGCTGAAACAGAAGAGACAAAGCAGGCATCACCTGTTGGTAGTACTTCAACAACCATAAATTTATCAGAGCGAGCACGGGAAAGGGCTCAAATGAGACAGGCTGGGTTGGTTTCTTCTACCCTTAGAGGTCGTGGAAGAGGCGGTGCTCCCCGTGGTCGAGTTGGTCGAGGTAGGGGAGTAGTACGCCGACCACCTCCACCACCTGGCAGTGATCAATGA 6264 0.4347 MPLFLSDEEFAWCSGDGSAVAAKADAFIRGLFNELDTVRSKAHAADINAEQNCLLIEQKYLSLTAEFSKLESNIAELQSSLDQRLREIDEVQSQNHRIKLEAVEKDREIERLRTEVAELHKSKRQLLELNEQKDLELSEKNATMKSYLDKIVRLSENAAHKEARLSEVEAELALCRAACTRFEQEKEIVERQNSWLNEELNAKVNIVFELRRKHTEFEADMTSKLADMQRQFGESSKSLLWNEDRVRELEIKLKSVQEELISAKDVAAANEEQLSAELSTVNKLNELYKESSEEWSKKAADLEGVIKAIESRLKQVEDDYKEKLEKELSARKQVEKEATDLKEKLEKCEAEIETRKKTDGVNNLPLSSFATEPWMEPIEADTMVEENSLLLVPRIPVGVSGTALAASLLRDGWSLAKMYAKYQEAIDALRHEQLGRKESEAVLQRVLYELEEKAEAIIDERVEHEKMADSYSLMNQKLRKSLNENSNLEKTIQELKADLKRHERDYNLVQKETDDLRKQVTVLLKECRDIQLRCGSMGYDIVDDASNIVSRTSTETEAEHVISEHLLTFKDINGLVEQNVQLRSLVRSISGHIENQEVEFKEKLEMELKKHTEESASKVAAVLQRAEEQGHMIEALHASVAMYKRLYEEEHNLHLSHTHSSEALAAVAEVGRNNLKTSIESSQEAAKKSLEKAAERVRCLEDDLAKSRSEIIVLRSERDKSALEANFAREKLNDIMKEFEHQKTEAKGILERNVEFSQLVVDYQRKLRESSESLIAAEELSRKLTLELSVLKQEKEVISNSEKRASNEVRSLSERVQRLQASLSTIQSTEEVRGEARAAERVKQEEYIKKLEREWAEAKQELNEERENVRRFTSDRDQTLKNSLRQVEDMSKELANALRAVASAESRAAVAEVKLSGLQRKMGSTDDKLVEIGGVSGPSTLSSDEVVAELQKAKDEIEKWKEEAHANKAHMLQYKSIAEVNEDALKEIEKAHEKFKIEADNGKKDLESELKSLRDKMLELENKSSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSQISAMEIQISGLKEKLDREHQKWRAAQTNYERQVVLQSETIQELTKTSEALALLQEEASELRKLANTQKIENNELKAKWEDEKVQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIQWAEKERNAAGISSGSSSADAFGDAGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQHESALKAAESAHASLETERAKSRSFLFTEEEFKALQLQVRELNLLRESNMQLREENKHNFEECQKLRELAQKVRAETENLENLLREREIELQRHKKEIGTLKMEKDNLNKKVSELLERSKNVDVEDYDRVKKLAREIQDKLRERDARIEELGKSLSEKQDSVSCLEKDLSNCRLELAEREKRINDILHNEANLKLDSEKHRKLLAQFKRIDVLSREKEDLGKENQQLSRQLDEIKQGKRSTCDTTGEQAMKEEKDTRIQILEKHLERQRDELKKEKEESRLERSRRLKTEKAIKDSYNNVEQEKIKLIIEIERYKESLKRLSDEVEKLKIVIGNLPEGSNVVQLLSGSNVDDFAAPYISAVESFEKEAQSVFRELGGRGNLGDAATITDGSAAATGSLVHPQSQGIASLAAPGVSGLPPKATGESEKRLALPKASVETRRTGRRLVRPKLLEKSEKRPEELQGGDTEMSDAEGPGGKPGQSSDTDTSNVVQSSQQLARKRVAPTSTSELREESVAPGEKSSDVLKKSKGSESLEENTEEQPAAILEFTGSHPVTEELFDSSDMPQCQNEEVGEAQNEDGEIAVGNDEESKDPRHLDGTGQEELQADKTGTLEENQDQSAETKVLSDEMQRNQTDPDNQQSTLAPSGEREEGELMPDTGDLEGASDLSNIAENQESREGQSESAATPERSPARVDDDALEAGEINSPELSSDDKNDEGDLVEEAADGSDKLIDVNEPISAESDQVAEPVASETATSTSTVAESSSSKVNLPVPRQGTPSAPAETEETKQASPVGSTSTTINLSERARERAQMRQAGLVSSTLRGRGRGGAPRGRVGRGRGVVRRPPPPPGSDQ* 2088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1344 2087 Coils Coil 447 467 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 1645 2087 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 1661 1699 - -
Gso8g1344 2087 Coils Coil 1397 1417 - -
Gso8g1344 2087 Coils Coil 880 921 - -
Gso8g1344 2087 Coils Coil 841 875 - -
Gso8g1344 2087 Coils Coil 683 710 - -
Gso8g1344 2087 Coils Coil 974 1023 - -
Gso8g1344 2087 Coils Coil 1486 1520 - -
Gso8g1344 2087 Coils Coil 60 132 - -
Gso8g1344 2087 Coils Coil 246 273 - -
Gso8g1344 2087 Coils Coil 1298 1360 - -
Gso8g1344 2087 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2063 - -
Gso8g1344 2087 Coils Coil 1215 1253 - -
Gso8g1344 2087 Coils Coil 1063 1094 - -
Gso8g1344 2087 Coils Coil 1270 1290 - -
Gso8g1344 2087 Coils Coil 943 970 - -
Gso8g1344 2087 PANTHER NUCLEOPROTEIN TPR 1 2063 - -
Gso8g1344 2087 Coils Coil 1445 1472 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 1456 1488 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 1747 1770 - -
Gso8g1344 2087 Coils Coil 1532 1566 - -
Gso8g1344 2087 Coils Coil 151 199 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 1980 2007 - -
Gso8g1344 2087 Coils Coil 1105 1171 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 1845 1880 - -
Gso8g1344 2087 Gene3D - 250 526 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 1901 1921 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 1818 1844 - -
Gso8g1344 2087 Pfam TPR/MLP1/MLP2-like protein 1048 1174 IPR012929 GO:0006606
Gso8g1344 2087 Coils Coil 471 519 - -
Gso8g1344 2087 Coils Coil 802 829 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 2014 2039 - -
Gso8g1344 2087 MobiDBLite consensus disorder prediction 1714 1746 - -
Gso8g1344 2087 Coils Coil 299 358 - -
Gso8g1344 2087 Coils Coil 774 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1344 Gso-Chr8 12741714 12775111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1344 K09291 - gmx:100788022 3762.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1344 8 12741714 12775111 Gso8g1344 8 12741714 12775111 ECH
Gso8g1344 8 12741714 12775111 Gso15g2181 15 50105760 50141632 GST