Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0402 ATGTCGCGGAGACCGGCGAATCCGTCTCGGCGATTCGGGGACAGTGGAGGTGGATTGTTTTCATCTTCGAAATCAAAGGCGTCACCGGTTTTGTCGGTTGGGCTCATAATTGTGGGATGTCTGTTTCTCATTGCGTATGTGTACAAGGGCTCAGGCGGGTTTGGTAGCCATTTGGAGTCTGTGAGCAGGGTTGAAGGAGATTATTTGTGTGCTAGAGAGGTCCTACGAGCAATTCCCGTTTTGCAGAAAGCATATGGTGATAGCTTACATAAAGTTTTGCATGTTGGTCCTGATACTTGCTATGTGGTCTCTAAATTTTTAAAGGAGGAGGAAACTGAAGCCTGGGGTATAGAACCTTATGATGTAGAGGATGCTGATGGTAATTGCAAAGCACTTATCCTCAAAGGCATTGTGCGTATGGCTGATATCAAGTTTCCTCTTCCATACAGGCCAAAATCTTTCTCTCTCGTAATTGTTTCGGATGCCCTTGATTTCTTATCTCCCAGATACCTTAACAAAACTCTTCCAGATTTGGCAAGGGTATCAGCTGATGGAATAGTGATATTTACTGGTTTTCCAGATAATCAAAAGGCTAAGGTTGCAGATGTTTCTAAAATGGGAAGAGCGGCTAAGATGAGGAGTTCATCCTGGTGGGTTCGGTTTTTCCTTTCGATTAACTTAGAGGAGAATGAAACTGCTTCCAAAAAGTTTGCACAGGCTTCAACTAAGAGTTCATACATTTCAAATTGCCAGATATTCCACCTGAAGTCTCTCCATTGA 780 0.4346 MSRRPANPSRRFGDSGGGLFSSSKSKASPVLSVGLIIVGCLFLIAYVYKGSGGFGSHLESVSRVEGDYLCAREVLRAIPVLQKAYGDSLHKVLHVGPDTCYVVSKFLKEEETEAWGIEPYDVEDADGNCKALILKGIVRMADIKFPLPYRPKSFSLVIVSDALDFLSPRYLNKTLPDLARVSADGIVIFTGFPDNQKAKVADVSKMGRAAKMRSSSWWVRFFLSINLEENETASKKFAQASTKSSYISNCQIFHLKSLH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0402 259 Gene3D Vaccinia Virus protein VP39 81 256 IPR029063 -
Gso6g0402 259 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 259 IPR044689 GO:0008168|GO:0045488
Gso6g0402 259 MobiDBLite consensus disorder prediction 1 25 - -
Gso6g0402 259 PANTHER PROTEIN, PUTATIVE-RELATED 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0402 Gso-Chr6 3734989 3738324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0402 K23871 - gmx:100778341 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0420 4 3896105 3912938 Gso6g0402 6 3734989 3738324 GST
Gso14g0803 14 8634241 8638789 Gso6g0402 6 3734989 3738324 PCT
Gso17g1974 17 38996030 39000116 Gso6g0402 6 3734989 3738324 PCT
Gso6g0402 6 3734989 3738324 Gso14g0803 14 8634241 8638789 PCT
Gso6g0402 6 3734989 3738324 Gso17g1974 17 38996030 39000116 PCT