Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0422 ATGGACATTGCTGCTCTTTTAACTTCTGCTGGAGTTAACATTGCTGTGTGCGTGGTGCTCTTTTCACTCTATTCAGTATTGCGGAAACAACCCAGCAATGTCCGTGTGTACTTTGGAAGAAGGGTAGCATCTCGGTGTTCAAAAAGCCGTGATCTTTGTTTGGAAAGATTTGTTCCCTCTCCGACTTGGGTAATGAAAGCATGGGAAACAACTCAAGATGAAATGCTGAGTACTGGTGGCCTGGATGCGGTGGTTTTTAGCAGAATGGTTGTGTTCAGTATTCGAGTATTTTCTGTTGCTGCTGTCATCTGCACTACTCTAGTGCTTCCAGTGAATTATTATGGTCGGGACAGAATACATAAGAATATACCTTTCGAATCACTGGAAGTATTTACCATTGAGAATGTTATAGAAGGATCTCGGTGGCTTTGGGCTCATTGTCTTGCGTTATACATCATAACTTTAACAGCTTGTTCTCTTCTTTACTGCGAATACAAGAGCATTACTAATTTGCGGCTAGTACATATTACTGCATCGTCGCCAAATCCTAGTCATTTTACAATTCTTGTTCGAGGAATACCCTGGTCTTCAGAACAATTATACTGCGATACAGTGAAGAAGTTTTTCGCATTTTATCACGCACAAACATATTTGTCGCACCAAATAGTGTACAAGTCTGGTACATTTCAGAAACTGAAGGATGACACAGAATATATGTGTAAGATGCTCAGTGGTAGTTGTGGTTCAATGGAACTGCCGTGTAAGCCAAGCTTTACGCAATGTTACTTTTGTGGAGGATCCACTAATTCTTTTAAGATTATTTCTAATGACATTGATAGTATGCATGGGAGGACAAGCTACACTGACCTGCATACAAATGCAAGAAAAAAGGAATGTGCAGCTGCTTTCGTGTTCTTTAAAAGTCGGTATGCTGCTCTTACGGTTGCCCAAAATCTTCAAACATCAAATCCCATGTTATGGGTCACAGACCTAGCTCCTGAACCACCGGATGTTTACTGGGCCAACCTTTGCATACCATACAGGCAACTTTGGATCCGTAAGATATCTATATTTGTGGCTTCTGTCACCTTCGTGCTTGTATTCCTTATCCCTGTCACTTTCGCACAAGGCTTGACTCAACTGGACAAGCTAGAGAGAATGTTCCCTTTTCTGGCAGGAACACTTCAAAAGAAATTTGTGATGCAGCTGGTGACTGGTTACTTGCCAAGTGCGATTTTGGTTTTATTTTTATATGCTGTTCCACCAGTGATGATGCTCTTTTCAACAGTGGAGGGATCTATTTCTCGTAGTGGAAGGAAGAGGAGTGCATGCACCAAATTTTTGTACTTCACAATTTGGAATGTGTTTTTCGTTAATGTTTTTGCCGGGTCTGTTATCAGCCAACTCGCAGTCTTTAGTAGTATAACAGAATTACCTGCCCAACTTGCCAAGGCTGTCCCAGTGCAGGCTACCTTCTTCACAACGTATGTTTTATCATCTGGTTGGGCAAGTTTGGCATTTGAAACTATGCAACTCTATCCACTTTTCTGCAATCTGTTCCAGAGATTCATACTCGGGTATAAGGAGGATACGATGAATGGCAACCTAACTTTTCCATACCATACAGAAGTTCCAAGGATCTTACTGTTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCCCTAATATTGCCCTTCTTATTGTTTTACTTTGTACTTGCGTACTTCGTTTACCGGAACCAGGTTAGTACTTCTTTAATGTTTTTGTCAGCTTAA 1779 0.4126 MDIAALLTSAGVNIAVCVVLFSLYSVLRKQPSNVRVYFGRRVASRCSKSRDLCLERFVPSPTWVMKAWETTQDEMLSTGGLDAVVFSRMVVFSIRVFSVAAVICTTLVLPVNYYGRDRIHKNIPFESLEVFTIENVIEGSRWLWAHCLALYIITLTACSLLYCEYKSITNLRLVHITASSPNPSHFTILVRGIPWSSEQLYCDTVKKFFAFYHAQTYLSHQIVYKSGTFQKLKDDTEYMCKMLSGSCGSMELPCKPSFTQCYFCGGSTNSFKIISNDIDSMHGRTSYTDLHTNARKKECAAAFVFFKSRYAALTVAQNLQTSNPMLWVTDLAPEPPDVYWANLCIPYRQLWIRKISIFVASVTFVLVFLIPVTFAQGLTQLDKLERMFPFLAGTLQKKFVMQLVTGYLPSAILVLFLYAVPPVMMLFSTVEGSISRSGRKRSACTKFLYFTIWNVFFVNVFAGSVISQLAVFSSITELPAQLAKAVPVQATFFTTYVLSSGWASLAFETMQLYPLFCNLFQRFILGYKEDTMNGNLTFPYHTEVPRILLFGFLGFTCSILAPLILPFLLFYFVLAYFVYRNQVSTSLMFLSA* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0422 592 Pfam Late exocytosis, associated with Golgi transport 6 162 IPR032880 -
Gso4g0422 592 Pfam Calcium-dependent channel, 7TM region, putative phosphate 353 583 IPR003864 GO:0016020
Gso4g0422 592 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 342 IPR027815 -
Gso4g0422 592 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 584 IPR045122 GO:0005227
Gso4g0422 592 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0422 Gso-Chr4 3944565 3955402 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0422 K21989 - gmx:100789875 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0422 4 3944565 3955402 Gso4g0422 4 3944565 3955402 ECH
Gso14g0804 14 8643411 8658307 Gso4g0422 4 3944565 3955402 PCT
Gso17g1973 17 38979969 38988834 Gso4g0422 4 3944565 3955402 PCT
Gso4g0422 4 3944565 3955402 Gso14g0804 14 8643411 8658307 PCT
Gso4g0422 4 3944565 3955402 Gso17g1973 17 38979969 38988834 PCT