Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0404 ATGGCTGAGGGCAGTGAGCATGCCGGTGCCGGTGGCCGTGGCGGCGGCAACTCACAGTCTCAAGTGATTCAAGTTCCTGAACCTGAACCACACCCAGTGATGGAGCAATTACCTGATGTTCACTATTGCATTAACAGTCCTCCTCCTTGGCCACAAGCACTGCTATTGGGATTCCAGCATTATATTCTGACTCTTGGCATGACCGTTCTGATTCCAACTGTGATTGTTCCTGAAATGGGTGGAGGCCATGCTGAGAAGGCCAAGGTGATACAGAATCTATTGTTTGTTTCTGGATTAAGCACACTTCTCCAAACTTGGTTCGGAACACGATTGCCAACTGTAGTTGTTGGTTCATACAGTTACATAATACCCACAATGTCAATTGTCCATGCCAAGAGATACAGTAACTATACAGACCCTTATGAGAGGTTCACTCACACAATTAGAGGAATACAAGGCGCCTTGATCATAAGTTCAATTTTCCATGTGTGTATGGGATTCTTGGGCATTTGGAGGTTTGCTATCAGGTTCCTAAGCCCACTTTCTGTAGTACCTTATGTAACGTTTACTGGACTCAGTCTTTATCATCTTGGATTCCCAATGGTAAAAAGTTCTACATTACGATTTGCGCTGTTGTTTTCCATTGCAAGTGCATGGTTACTTGCACAGCTTCTGATTTCAAGCACTGCATATAACCACAAGCCAGAAAGTACTCAGAATAGTTGCCGCACTGATCGTGTTGGTCTTATTAGTGGTTCTGAATGTCCTACCTTCAACTTCGGAGAAGCTCTTGCTATGATAGCCGCTTCTTTTGTTTCTCTATTTGAGTCTACTGGTACATTTTATGCTGCGGCAAGATATGGAAGTGGAACACCCAATGCTGGATTATTGGCATTGACAAAGGCGGGAAGCCGAAGAGTCATCCAAATATCAGCCGGCTTTATGATTTTCTTCTCTATTGCTGGAAAACTTGGAGCAGTTTTAGCTTCTATACCTTTGCCAATCATAGCAGCAATGAACTGTATATTCTTCGGCTATGTCTCTTCTGCAGGTCTTGATTTTCTACAGTTCTGTAATCTCAACAGTTTCAGAACCAAATTCGTGTTGGGTCTCTCATTCTTCCTCGGCATCTCCATTCCGCAATATTTCATAGAATATTTTCATGTAAAGCATCATCACGGATGGTTCAATGATATCGTTAGCGTGATCTTCATGTCGCATACAACGGTGGCTGCATTGGTTGCGTTCATTTTGGACATCACACTCTCACGTGAAGATGATGCAGTCCGTAAGGACATTGGTTTGCAGTGGTGGGAGAAGTTCAGTGTATATAATGCTGATGGTCGGAATGCTGATTTCTATAAATTACCATGTAGACTCAATGAATTCTTCCCTGCCCTTTAA 1404 0.4316 MAEGSEHAGAGGRGGGNSQSQVIQVPEPEPHPVMEQLPDVHYCINSPPPWPQALLLGFQHYILTLGMTVLIPTVIVPEMGGGHAEKAKVIQNLLFVSGLSTLLQTWFGTRLPTVVVGSYSYIIPTMSIVHAKRYSNYTDPYERFTHTIRGIQGALIISSIFHVCMGFLGIWRFAIRFLSPLSVVPYVTFTGLSLYHLGFPMVKSSTLRFALLFSIASAWLLAQLLISSTAYNHKPESTQNSCRTDRVGLISGSECPTFNFGEALAMIAASFVSLFESTGTFYAAARYGSGTPNAGLLALTKAGSRRVIQISAGFMIFFSIAGKLGAVLASIPLPIIAAMNCIFFGYVSSAGLDFLQFCNLNSFRTKFVLGLSFFLGISIPQYFIEYFHVKHHHGWFNDIVSVIFMSHTTVAALVAFILDITLSREDDAVRKDIGLQWWEKFSVYNADGRNADFYKLPCRLNEFFPAL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0404 467 MobiDBLite consensus disorder prediction 1 24 - -
Gso4g0404 467 Pfam Permease family 292 383 IPR006043 GO:0016020|GO:0022857|GO:0055085
Gso4g0404 467 Pfam Permease family 52 206 IPR006043 GO:0016020|GO:0022857|GO:0055085
Gso4g0404 467 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 207 292 - -
Gso4g0404 467 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 293 466 - -
Gso4g0404 467 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 12 203 - -
Gso4g0404 467 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 12 203 - -
Gso4g0404 467 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 293 466 - -
Gso4g0404 467 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 207 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0404 Gso-Chr4 3675802 3680366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0404 24 466 Organic Solute Cotransporters AT1G65550 52.562 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0404 - - gmx:100781885 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0404 4 3675802 3680366 Gso6g0382 6 3552921 3557164 GST
Gso4g0404 4 3675802 3680366 Gso14g0774 14 8158031 8162809 PCT