Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1998 ATGGCGAATAACGAGAAAGACGCATGTTCTTCCTTCACCGATTTCCCAGAGGACATTCAGGTGTGCATCCTCTCGTTCCTGGGCCCACCGGAGATCGCAACCCTAGCCTGCACTTCGAAGCGAATGGGCTCTCTCTGCGCCACCGACTCCAAGCTCTGGTTCTCTATGTGCGAGCGCAGGTGGGGCTCCTACACCCGCATCACCCAGTGGGCCCAAGGAAAAAACCCCACTCTCTCCTTCAAGCACCTCTACAACACCCTCCACCGCTGGGAGAATCTCCTCGGCTTCTGGCGCCGAAGTGGAACCGGAATCCCTTCCTTGCTCTTCTTCGAGTGGGGCCCATCCTTCATCTCCGCTTCTAGGGTTTCCCCTTCCGCTTCCGACTCCAATTCCGTCACCTACGGTGTCACCAAAACGCCGTTCCTCTGGATGAGTCTCTCCGAGGAGGGACACGTGGTTACTTATCTCGATCCCGACGGGAGAAGTGATTTTAAACCCGAGATTCGGAGCGAATTGGTGGCTGTGGATGTGAGTTTCATGGGGAAGACGCATCTTGTTGTGGAGGAGAAGCGGGTTAGGGGTGGTGCTTGTCATGATTGTGGAGATGATGTTGTGGTGGTGGAGAGTGGATCGCCGCCGGAGAAACTGATGGCGGAGATTTACCAGCATTTCGCGAACCCCCGGAGTCCCGGAAGTGATCGGTCCAGGAGGCAGAGGCGAAGGGAGAAAGAGAGGCTGGCCGGGAGGAAGTGGGAGCCTCAGCATTTTGTCAAGATTGTCAACTGCTCGCCGACTCCGGCGCGGCCCTTGCAGGGCCTGTGGAAGGGAATTTGCGGTGACATGAGTTTGGCATTTTACCTTGTGGGGTATGATGACATTGGGGGCATTGCCTGCCGGCGGATTGGGGATCCTCCTGACCGTTTTTCGGGACATGCCCCAGTTTTCTGGACTTCTAATGCTACGTTTCTGGAATCTCCCTTTTCTCCGGAGGAAGAATCTTTGTATGACAGTCGTGTTCATCTTCGACCACTTCAACCGGGCAATGAAGTTCTTGAGCAGTTCCCTTTCTCGGATAGTGAAGTGGTAAATCAAATTCAGCAGTTCCAATTGTCCGACAATGTGGTAGACCGAATTCTTCACATAAGTTCAAGTTATGATTTAGTTGTTCCAGACCTTGCCGGAACATTGAATCCAAGGAGTGCAGAAGGAAGGATTTGGCAGTACCGAAATGGTACTTTTGGATTTGGATTCCTTTCGGACAATTTCGTCATAGACATGAAACATATTGTCCACAATGGTTGTATTGTGGATACTGTAAATTCTTCTGCTAATTGA 1335 0.5221 MANNEKDACSSFTDFPEDIQVCILSFLGPPEIATLACTSKRMGSLCATDSKLWFSMCERRWGSYTRITQWAQGKNPTLSFKHLYNTLHRWENLLGFWRRSGTGIPSLLFFEWGPSFISASRVSPSASDSNSVTYGVTKTPFLWMSLSEEGHVVTYLDPDGRSDFKPEIRSELVAVDVSFMGKTHLVVEEKRVRGGACHDCGDDVVVVESGSPPEKLMAEIYQHFANPRSPGSDRSRRQRRREKERLAGRKWEPQHFVKIVNCSPTPARPLQGLWKGICGDMSLAFYLVGYDDIGGIACRRIGDPPDRFSGHAPVFWTSNATFLESPFSPEEESLYDSRVHLRPLQPGNEVLEQFPFSDSEVVNQIQQFQLSDNVVDRILHISSSYDLVVPDLAGTLNPRSAEGRIWQYRNGTFGFGFLSDNFVIDMKHIVHNGCIVDTVNSSAN* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1998 444 SUPERFAMILY F-box domain 5 91 IPR036047 GO:0005515
Gso17g1998 444 Gene3D - 3 95 - -
Gso17g1998 444 MobiDBLite consensus disorder prediction 230 245 - -
Gso17g1998 444 Pfam F-box domain 13 49 IPR001810 GO:0005515
Gso17g1998 444 MobiDBLite consensus disorder prediction 225 245 - -
Gso17g1998 444 ProSiteProfiles F-box domain profile. 9 56 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1998 Gso-Chr17 39331271 39333516 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0770 14 8119999 8122279 Gso17g1998 17 39331271 39333516 GST