Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1994 ATGGCCGAACTCTTCAGGCTCAGTTCCGTCGAGTGGAGCCCTTCGCCGGTCATCGCTTTAGCCACCAGCTTCGACGGCTCGCGTGTCGCCGCCGCCCGCAAAGACGGCTCCCTCGAAATCTGGCTCGTCTCTCCCGGCTCCATCGGCTGGCACTGTCAGCTGACTATACACGGAAACCCTAACGGAAGAGTAACGTCGCTTATTTGGTGCCCCGGCGGCCCCGACGGAAGCCGCTTGTTTTCGTCAAACATAGATGGCTCCGTTACTAAGTGGGATCTTTTCCACTTGACGCAGAAGACGGTGCTGCCATCAGACAGTGTTACAATCTGGCAAATGGCAGTGACTTTCCCTAAGAGTGACGAGATCAATGATAAAAGGAAGGGTGGACAAATGGGGAATGGGTTTCATGATTTTGATGAACATGAGAGCATTGAAAGTGATGAAGATGATGATTCTGGTTCACCTGGTCCTCTCGGGCTATTGGTTGGTGAGCATCCACGCGTGGCAATTGCCCTTGACAATGGATGTGTGAGAATTTGTGATATCTCTGACACAGATGAATTTATTCTTGTAAAATCTTTGCCCCCGGTGAAAGGACGAGTTTTAAGTGTGACTTGGAGTACAGATGCTAACTATATATATTCAGGAAGTAGTGATGGGTTGATACGATGCTGGAATGCTACATTGGGCAATGAAATCTATAGGATTACAGCTGGACTTGGAGGGTTGGGCAATGGACATGAACTTTGTATATGGTCATTACTGTCTTTAAGGTCTGGTACACTTGTTAGTGCGGACAGCAGTGGTAGTGTCCAGTTTTGGGACAGTCAACATGGAACTCTCTTGCAAGCACATTCTTTGCACAAGGGACATGTACATGCTCTGGCAGCATGTCCTAGTCATAATAGGGTGTTCTCTGCTGGTTCTGATGGCCAGGTAATTCTTTACAAGCTATCTAGTAGTCAGTCAACATCATCCAATGATATCAATTCTCCATCAACAATGAAGAGATGGATCTATGTTCACTATGTAAGGGCTCATACACATGACATCAGGGCCCTAGCTGTTGCTGTACCGATAAGTCATGAAGCAGCAGATATTAAGCCAGAAAAGAGGATTAAAAGAGCTCGACGTGCAGAAAATCCCATTAGTTTCCGTTACCATAAGTGGGCTCATTTGGGGGTTCCTATGCTTATCTCAGCAGGAGATGACACAAAACTTTTTGCATACCCAGTGAAAGAATTCACCATGTTTTCTCCTCATGATATCTGTCCTGCGCCTCAGAGAACACCCATTCAACTAGTGCATAATTCTGTCTTTAATCAACGCAAACTGCTTTTAGTCCAATCTTCGCAAAAGATAGAGGTTCAATTGCTACAACTAAAAAATGTCCGCACCTCTGGAGGCTTTACAAAGAACGTTGTAGTGGCTCAAGTTAACAGTAAGGCATCTCAGAAGATAATTTGCAGCACCATTTCTAATTCAGGGGCGCTATTTGCATACTCTGATCATAAAAAGCCTAGTCTTTTTCAATTGAAAAGGGATGAAGTTGGAAAAATCAAGTGGGATGTTAGAAAAAGGGAGCTTCCTCAGATATTACCATTTGCCCATTCTATGATTTTCACTCATGACTCCTCCAAGTTGATAGTAGCAGGTCACGATAAAAGGATATATGTTGTGAATGTTGGGGGGCCAGATGAAGTTAAGTCAGAATTACTGCATACTTTTACACCCCTTCGCAAATCACAAGATCAAGAATTACCTCCGACTGAGCCACCCATAACAAGATTGTTTACTAGTTCTGATGGGCAGTGGTTGGCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAACTTGGAGATACTAAGCCAGCACTGGTTCATTTCAAGATTAGATGGCGCCTCTGTTACAGCAGGTGGATTTCCTCCCCAGAACGACAATGTACTGATAGTTACAACTTCCTCAAATCAAGTGTATGCTTTTGACGTAGAGGCCAAGCAGTTGGGAGAATGGTCCAAACGGCACACATATGCTCTTCCTAGGAGATACCTGGAATTTCCTGGTGAAGTTATTGGGCTCTCATTCCCTCCATCAGAAACTTCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAGGGCTATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGATGAAAGTGATATGCTAAATACTAAAGATTCAAGGGCAATGAATTCACAAAATTTTAATGTTAAGAAGAGGATTGAAGTTAAGAAGATGATTGAAGTTAAGAAGGAACATAATAGGAGGAACTTTGAAGTTATACCTTTCGAGAATCCTGTTTTATGTTTAGGTCATACTTCAAAAAATTCCATCTTTATGGTAGACAAACCATGGTTGCAAGTTGTCAAGAGTTTAGAAGGCCGACCAGTCCACAGACATATATATGGGACATGA 2460 0.4366 MAELFRLSSVEWSPSPVIALATSFDGSRVAAARKDGSLEIWLVSPGSIGWHCQLTIHGNPNGRVTSLIWCPGGPDGSRLFSSNIDGSVTKWDLFHLTQKTVLPSDSVTIWQMAVTFPKSDEINDKRKGGQMGNGFHDFDEHESIESDEDDDSGSPGPLGLLVGEHPRVAIALDNGCVRICDISDTDEFILVKSLPPVKGRVLSVTWSTDANYIYSGSSDGLIRCWNATLGNEIYRITAGLGGLGNGHELCIWSLLSLRSGTLVSADSSGSVQFWDSQHGTLLQAHSLHKGHVHALAACPSHNRVFSAGSDGQVILYKLSSSQSTSSNDINSPSTMKRWIYVHYVRAHTHDIRALAVAVPISHEAADIKPEKRIKRARRAENPISFRYHKWAHLGVPMLISAGDDTKLFAYPVKEFTMFSPHDICPAPQRTPIQLVHNSVFNQRKLLLVQSSQKIEVQLLQLKNVRTSGGFTKNVVVAQVNSKASQKIICSTISNSGALFAYSDHKKPSLFQLKRDEVGKIKWDVRKRELPQILPFAHSMIFTHDSSKLIVAGHDKRIYVVNVGGPDEVKSELLHTFTPLRKSQDQELPPTEPPITRLFTSSDGQWLAAVNCFGDIYVFNLEILSQHWFISRLDGASVTAGGFPPQNDNVLIVTTSSNQVYAFDVEAKQLGEWSKRHTYALPRRYLEFPGEVIGLSFPPSETSSSPSATSSSVVVYSSRAMCLIDFGLPVEQDESDMLNTKDSRAMNSQNFNVKKRIEVKKMIEVKKEHNRRNFEVIPFENPVLCLGHTSKNSIFMVDKPWLQVVKSLEGRPVHRHIYGT* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1994 819 ProSiteProfiles Trp-Asp (WD) repeats profile. 285 326 IPR001680 GO:0005515
Gso17g1994 819 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 194 226 - -
Gso17g1994 819 SUPERFAMILY WD40 repeat-like 12 320 IPR036322 GO:0005515
Gso17g1994 819 Pfam WD domain, G-beta repeat 201 226 IPR001680 GO:0005515
Gso17g1994 819 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 819 - -
Gso17g1994 819 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 819 IPR044622 GO:0010073|GO:0035266
Gso17g1994 819 MobiDBLite consensus disorder prediction 121 158 - -
Gso17g1994 819 Gene3D - 439 686 IPR015943 GO:0005515
Gso17g1994 819 SMART WD40_4 237 275 IPR001680 GO:0005515
Gso17g1994 819 SMART WD40_4 49 92 IPR001680 GO:0005515
Gso17g1994 819 SMART WD40_4 187 226 IPR001680 GO:0005515
Gso17g1994 819 SMART WD40_4 580 619 IPR001680 GO:0005515
Gso17g1994 819 SMART WD40_4 3 42 IPR001680 GO:0005515
Gso17g1994 819 SMART WD40_4 278 317 IPR001680 GO:0005515
Gso17g1994 819 SMART WD40_4 526 561 IPR001680 GO:0005515
Gso17g1994 819 MobiDBLite consensus disorder prediction 121 141 - -
Gso17g1994 819 Gene3D - 136 427 IPR015943 GO:0005515
Gso17g1994 819 SUPERFAMILY WD40 repeat-like 245 669 IPR036322 GO:0005515
Gso17g1994 819 ProSiteProfiles Trp-Asp (WD) repeats profile. 194 235 IPR001680 GO:0005515
Gso17g1994 819 Gene3D - 6 131 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1994 Gso-Chr17 39282692 39289438 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1994 K14548 - gmx:100776641 1566.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0776 14 8177999 8184573 Gso17g1994 17 39282692 39289438 GST