Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1987 ATGTTCTTCCACGAAGAAGCTGAAGCGGTTCATTCCTCATACTTCCCGGTTCTTGAAACCATGTTCACTCCAAGTGAAATAGAGGAGCTATTTTCCCTCGTTAACGAACCGGCCAGCCCCGGGTTGGGATCCGGTTCACAAGGTTCGAACCGGGAAGTCCGGTCCATGCACGAGAGAAAGCTTAGGCGAATGCAGTCGAACCGGGAGTCGGCCAGGCGGTCCCGCTGGAGAAAGAAGCGGCATTTGGAGAACCTCACGAACCAACTGAACCGGTTGAGAACGGAAAACCAAGAATACAAAAACCGGTTATTCTTAACCATGCACCAGAATCTTCTACTTTCCGTGCAGAATGAACGTCTTAGATCCGAATCCGTGACCCTTATGGCTAGACTCTCGGATCTTTATCAAAATTTAGGCACCATGATGATTTCACAATAG 438 0.4909 MFFHEEAEAVHSSYFPVLETMFTPSEIEELFSLVNEPASPGLGSGSQGSNREVRSMHERKLRRMQSNRESARRSRWRKKRHLENLTNQLNRLRTENQEYKNRLFLTMHQNLLLSVQNERLRSESVTLMARLSDLYQNLGTMMISQ* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1987 145 CDD bZIP_plant_GBF1 60 109 IPR045314 GO:0003700|GO:0006355
Gso17g1987 145 Gene3D - 57 108 - -
Gso17g1987 145 Pfam bZIP transcription factor 59 103 IPR004827 GO:0003700|GO:0006355
Gso17g1987 145 Coils Coil 54 102 - -
Gso17g1987 145 SUPERFAMILY Leucine zipper domain 59 113 IPR046347 GO:0003700|GO:0006355
Gso17g1987 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Gso17g1987 145 PANTHER BZIP TRANSCRIPTION FACTOR 26 142 - -
Gso17g1987 145 MobiDBLite consensus disorder prediction 38 77 - -
Gso17g1987 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 142 - -
Gso17g1987 145 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Gso17g1987 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 103 IPR004827 GO:0003700|GO:0006355
Gso17g1987 145 MobiDBLite consensus disorder prediction 52 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1987 Gso-Chr17 39208155 39208592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1987 12 138 bZIP Transcription Factor Family AT3G49760 37.037 2.14e-19 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso17g1987 bZIP_1 1.2e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1987 - - gmx:102668006 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0781 14 8283622 8284618 Gso17g1987 17 39208155 39208592 GST
Gso17g1987 17 39208155 39208592 Gso6g0393 6 3632092 3632526 PCT
Gso6g0393 6 3632092 3632526 Gso17g1987 17 39208155 39208592 PCT