Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1986 ATGGAGAAGATCTGCGTCGCCGTTCGTCTTCGCCCACTGGTTTCCCAAGACTCTTCTTCTTCCTCCGTCGGAACTTTCTGGAAGGTCGAAGATAACCGCATCTCTCTCCACAAGATCCATGGCACTCCACTCTCTGCTTCTTCTTACGCTTTCGATCACATATTTGACGAAAGAAGCACCAATGCTAGCGTCTACGAGCTTCTCGCCAAGGACATCATTCACGCCGCGCTCGACGGCTTCAACGGAACTGCATTTGCGTATGGGCAGACCAGTAGTGGCAAGACTTTCACCATGAATGGTTCTGAAACTGACGCAGGAGTGATTCCTCGCGCAGTTGGAGACATATTTGCGACAATGGAGATGATGTCTGATCGAGAGTTTCTGATACGAGTTTCCTACATGGAGATCTACAACGAAGAAATTAATGACCTTCTTGTTGTTGAAAATCAGAAATTGCAAATTCATGAGAGCTTGGAGCGTGGAGTATTTGTTGCAGGGCTGAAAGAGGAAATTGTAAATAATGCTGAACAAGTGCTGAATCTCATTAAAGCAGGGGAAGTTAACAGACACTTTGGTGAGACAAATATGAATGTAAGGAGTAGCAGATCGCACACAATATTTAGAATGGTGATTGAAAGCAAAGCAAAGGATTCCAATTCTTCCAATGATTGTTCAATTAATGATGTTGTTAGAGTTTCAGTCTTGAATTTAGTAGATCTAGCTGGTTCTGAAAGGATTGCTAAGACTGGAGCTGATGGAGTACGTTTAAAAGAAGGAAAATATATTAACAAGAGCTTGATGGTTTTGGGGAACGTTATCAACAAACTAAGTGAGGGTTCAAAGCAAAGGGGGCATATCCCGTATCGTGATAGTAAATTAACTCGTATACTCCAACCTGCTCTTGGTGGTAATGCCAAAACGTCCATTATTTGCACCATAGCACCAGAAGAGATTCACATTGAAGAAACAAGGGGAACTCTTCAGTTTGCTAGCAGAGCCAAGCGCATCACAAATTGTGTTCAAGTGAATGAGATATTGACGGAAGCAGCCTTGTTAAAACGGCAACAATTAGAGATAGAGGAGCTACGTAAGAAGCTTCAGGGATCCCATGCTGAGGTGCTCGAGCAAGAGATTCTTAAACTCAGGAACGATTTGCTCAAGTATGAAATGGAGCGTGGGAAGCTTGAAATGGAACTGCAAGAAGAGAGGAAATCACGTGATCAATGGATTAGGGAGCAACGGATGAAAATTGAAAATTCTTGCACTACTAAATCTTTCTCAGATTGTGGGACGAATGACAATCAGGGATCGGGATGTTTTAGGCGCGGATTTGTGGAAGAGTACAGTGACATTAGTAGTAGTATATCTCAAGGAGATATTTTCAAATCTCCTAAGGTAGATCCCAATGCTTTTGTAGCCAGGCGATCAAAGAATTCAACATTGCCAGATCACAGCCCCCTTCCAGATGCTTTCTGTAATGTGGCTGATGAAGATATGTGGGTGAAAATGAACAATGGTTATATTGCGGACCTTGATTCCCTTCAAACTACTCCTCCCACCAACCGAAAAGTTCAGTCATTCCCGACAAGTGATGCAACTGTTGGTTGTACAAGTGAAATTGAGAAGTATGAACGAGAGGTTCAAGATTTGAGGAAACAACTGGAACTAGCTAAAGAAAGAATAAATGAACTCGAGCAAAAGCATTCAGAAGAAGTGCCATCAAGCAAGCAATTAATCGTTGAGACACCCAAACATCAACAAGAAACACGACTAACTCATGAATTACCTCTGAGGTTATCTGAATCTGAGGGAAACTTCAAAGATAGCTTTGAGGAGGCTTTGTCAGTAATGCAGAGATTTGCATCGGGTGGCACATTATCAACTGCGAAGATACTTTCAACCATGAGTGAAATTGGAGATCATCTATTTGCAACTTTGGAAGGTCATTTTGCTGTGAATACGGGTGGTGAAAGGTCTTCCACCGGAAACAGTGCTCTAATCAATGAACACCAAAAAGAGTTTCGTCAGAGGATTGATAACATAATTACATCGTTGGAGTTATCCGAAACCTCAATAACAGGACAGGAGTGGAAACATAAGTGCAGCTGTGAACCCAAGGGCTCTGATTTGGGAGGTGAAACTGCAAAGGATGATTTAAATGAAAGATATGAAAACCTAGAAAGGGAGTTACTACTGTTGAAGGTCGAAAGAGACTCTTTGCTGCAGAAGTTCTCTGAATCATCAGAGAAGCTATCAATGGTTTCCAGCCAAAAGGAAAATGCTTTGAAAGAGTTAAATACTGAAGTGCTGAGAAGGAAAAATATAGAAGGGGAAGTTAAGCAGATTGCTGCAGCTTTTACTAATCGTCAGAAATCACTCATTTCCTTTCATAGTGATCTTAAGACCAAAATTGAGAATTGGAGAGCCCAGACTACAATCTTGGTGCCCAAATCTTTTGGTTTTAAGGACTAG 2472 0.4175 MEKICVAVRLRPLVSQDSSSSSVGTFWKVEDNRISLHKIHGTPLSASSYAFDHIFDERSTNASVYELLAKDIIHAALDGFNGTAFAYGQTSSGKTFTMNGSETDAGVIPRAVGDIFATMEMMSDREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLERGVFVAGLKEEIVNNAEQVLNLIKAGEVNRHFGETNMNVRSSRSHTIFRMVIESKAKDSNSSNDCSINDVVRVSVLNLVDLAGSERIAKTGADGVRLKEGKYINKSLMVLGNVINKLSEGSKQRGHIPYRDSKLTRILQPALGGNAKTSIICTIAPEEIHIEETRGTLQFASRAKRITNCVQVNEILTEAALLKRQQLEIEELRKKLQGSHAEVLEQEILKLRNDLLKYEMERGKLEMELQEERKSRDQWIREQRMKIENSCTTKSFSDCGTNDNQGSGCFRRGFVEEYSDISSSISQGDIFKSPKVDPNAFVARRSKNSTLPDHSPLPDAFCNVADEDMWVKMNNGYIADLDSLQTTPPTNRKVQSFPTSDATVGCTSEIEKYEREVQDLRKQLELAKERINELEQKHSEEVPSSKQLIVETPKHQQETRLTHELPLRLSESEGNFKDSFEEALSVMQRFASGGTLSTAKILSTMSEIGDHLFATLEGHFAVNTGGERSSTGNSALINEHQKEFRQRIDNIITSLELSETSITGQEWKHKCSCEPKGSDLGGETAKDDLNERYENLERELLLLKVERDSLLQKFSESSEKLSMVSSQKENALKELNTEVLRRKNIEGEVKQIAAAFTNRQKSLISFHSDLKTKIENWRAQTTILVPKSFGFKD* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1986 823 Gene3D Kinesin motor domain 1 368 IPR036961 -
Gso17g1986 823 Coils Coil 716 743 - -
Gso17g1986 823 CDD KISc_CENP_E 3 336 - -
Gso17g1986 823 Coils Coil 533 571 - -
Gso17g1986 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 368 IPR027417 -
Gso17g1986 823 PANTHER CENTROMERE PROTEIN E 2 420 - -
Gso17g1986 823 PANTHER CENTROMERE PROTEIN E 2 420 - -
Gso17g1986 823 Coils Coil 345 412 - -
Gso17g1986 823 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1986 823 PRINTS Kinesin heavy chain signature 194 211 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1986 823 PRINTS Kinesin heavy chain signature 234 252 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1986 823 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1986 823 SMART kinesin_4 1 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1986 823 ProSitePatterns Kinesin motor domain signature. 233 244 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso17g1986 823 ProSiteProfiles Kinesin motor domain profile. 3 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1986 823 Pfam Kinesin motor domain 9 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1986 Gso-Chr17 39189365 39196432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1986 2 398 Miscellaneous Gene Families AT4G39050 44.888 9.08e-94 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1986 K11498 - gmx:100775563 1548.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0782 14 8301960 8309196 Gso17g1986 17 39189365 39196432 GST