Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1982 ATGGATCTTGGGGTGGTGGGTTTGGAGGGGGTGGTGGGTTCAGAAAGTGGTTGTGTGTTTGGTTCTTCTCTTGCTTCAGATCCTGAGACAAAGCACAAGTGGTACGGATCTGGTTTGCTCAAGCAAGAGAGATCTGCCATAGCTACTGAAGATGATGAGTGGAGAATTTCCAAAGTTGCTAAAACTGATCATGACATGTCTTCAGCCTCCAAAGCAATGTTCTTTCAGCAAAGAAACAACTCTTTGTTGAGATCTAATAATGCAACTCTTTTCTCTGATGGTCATCACCAATCACAAATGTTGAACTTCTCTTCTCCAAAGTCAGAGACTTTATTGGTAGATAAGGCTTTCTCAAATGCCACATTGCCTTTTTCTTATCATCAATTGTCTAGTTACAGCAGAAATACAGGTTACAATTCGGGAAGCATAAGCATGCATGGGGCTTTGGCTAGTGTGAGAGGGCCATTCACTCCATCACAGTGGATGGAGCTTGAACACCAAGCCTTGATCTACAAGTACATCACAGCAAATGTTCCTGTGCCAACTCATCTTCTCATTCCCATCAGAAAAGCACTTGATTCCGTTGGCTTCTGCAACTTCTCATCTGGACTCCTCAGATCCAACTCGTTGGGATGGGGAGGCTTCCATTTGGGATTCTCCAACAGCACAGACCCTGAGCCAGGGAGGTGTAGGAGAACAGATGGGAAAAAATGGCGATGCTCAAGAGATGCTGTAGTAGATCAGAAGTATTGCGAACGGCACATGAACCGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACTAACACACCTAATGCTTCCTCAAACTCAACCGTGGTGCCCGGCAACCACAACAACAACACCTTTGCACACATCAATGTGCACCACCCTCTTCCTCCTCATTCCTCTCCAGCCAATACCATCAATAGGATGTTTATGAGTAATAATAAAGAGAACAACAACACGAGTGAGAGGATGAAGGATGGCCTTGCCCTTCCCATGCTACCTCCTACTCTTGAGCTGAAACCAAAGGACAACAACAACTCTTTCATGGTTCATAAACACCAAGAACCATATGATGAATCCTCAAGGAACAAGAATGAGTTTGGACTCGTCACTTCTGATTCCTTGCTTAACCCTTCACAGAAAAGAAGCTTTGATTCTTCTTCTTCTTCACAAAAGGATGATTCTTCTGAGTCCCAACAACAACATTCCCTCAGGCACTTCATTGATGACTCTCCCAAACCACAGTCTCATCATAATCATAACCATCGTTCGTCGTCATCTATTTGGCCTGAACTCGACAACATGCAGTCAGACAGGACTCAGTTATCAATCTCCATACCAATATCTTCCTCAGATCACTTCATGTCATTTGCAACTTCCTCGCCCTCGAATGAAAAACTCACGTTGTCGCCACTAAGGCTTTCGAGGGAGTTCGACCCCATTCAAATGGGATTAGGAGTGGGAAGTGCCTCCAATGAAGCAAACACTAGGCAAGCCAATTGGATTCCAATCACTTGGGAGAGTTCAATGGGTGGTCCTCTTGGAGAGGTTTTGAACCTTAGTAACAATAATAATAACAGCAATGCAAGTGATCAATGTGGCAAGAACAACAACAACACTTCAGCTCTCAACCTCATGAAAGATGATGACGATGATGATGGGTGGGACAATAGTCCTCCTCCAATAGGGTCATCACCAACTGGGGTGCTTCAAAAAACAGCATTTGGATCACTTTCCAACAGCAGTGCTGGGAGCAGTCCAAGAGGGGCACCAGAGAACAACAACAAAGAATAG 1827 0.451 MDLGVVGLEGVVGSESGCVFGSSLASDPETKHKWYGSGLLKQERSAIATEDDEWRISKVAKTDHDMSSASKAMFFQQRNNSLLRSNNATLFSDGHHQSQMLNFSSPKSETLLVDKAFSNATLPFSYHQLSSYSRNTGYNSGSISMHGALASVRGPFTPSQWMELEHQALIYKYITANVPVPTHLLIPIRKALDSVGFCNFSSGLLRSNSLGWGGFHLGFSNSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTNTPNASSNSTVVPGNHNNNTFAHINVHHPLPPHSSPANTINRMFMSNNKENNNTSERMKDGLALPMLPPTLELKPKDNNNSFMVHKHQEPYDESSRNKNEFGLVTSDSLLNPSQKRSFDSSSSSQKDDSSESQQQHSLRHFIDDSPKPQSHHNHNHRSSSSIWPELDNMQSDRTQLSISIPISSSDHFMSFATSSPSNEKLTLSPLRLSREFDPIQMGLGVGSASNEANTRQANWIPITWESSMGGPLGEVLNLSNNNNNSNASDQCGKNNNNTSALNLMKDDDDDDGWDNSPPPIGSSPTGVLQKTAFGSLSNSSAGSSPRGAPENNNKE* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1982 608 MobiDBLite consensus disorder prediction 528 555 - -
Gso17g1982 608 SMART QLQ_2 154 190 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso17g1982 608 MobiDBLite consensus disorder prediction 356 373 - -
Gso17g1982 608 MobiDBLite consensus disorder prediction 269 292 - -
Gso17g1982 608 MobiDBLite consensus disorder prediction 343 441 - -
Gso17g1982 608 ProSiteProfiles WRC domain profile. 224 268 IPR014977 -
Gso17g1982 608 ProSiteProfiles QLQ domain profile. 155 190 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso17g1982 608 PANTHER - 26 602 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso17g1982 608 MobiDBLite consensus disorder prediction 571 608 - -
Gso17g1982 608 MobiDBLite consensus disorder prediction 528 608 - -
Gso17g1982 608 MobiDBLite consensus disorder prediction 409 428 - -
Gso17g1982 608 PANTHER GROWTH-REGULATING FACTOR 9 26 602 - -
Gso17g1982 608 MobiDBLite consensus disorder prediction 253 292 - -
Gso17g1982 608 Pfam QLQ 155 189 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso17g1982 608 MobiDBLite consensus disorder prediction 375 408 - -
Gso17g1982 608 Pfam WRC 225 267 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1982 Gso-Chr17 39141120 39145576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1982 1 587 GRF Transcription Factor Family AT2G22840 39.675 1.40e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gso17g1982 WRC 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1982 - - gmx:100819396 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0787 14 8374962 8379717 Gso17g1982 17 39141120 39145576 GST