Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1973 ATGGATATTGCTGCTCTTTTAACTTCTGCTGGAATTAATATTGCTGTGTGTGTGGTTCTCTTTTCATTTTATTCTGTATTAAGAAAACAACCCAGTAATGTTAATGTGTACTTTGGGAGGAGACTAGCCTCTCAGCATTCAAGACGCATTGATCTCTGCTTGGAAAGATTTGTTCCCTCCCCTAGCTGGATATTGAAAGCATGGGAAACATCTGAGGATGAGATATTGGCTATTGGTGGCTTGGATGCTGTGGTTTTTGTGAGGATACTTGTTTTCAGTATTCGAGTGTTTTCCATTGCTGCTGTCATATGCACTATTCTGGTGCTTCCTGTAAATTACCATGGAATGGACAGAATGTATAAGAATATACCTTTGGAGTCGCTGGAAGTATTTACCATTGAGAATGTCAAAGAAGGATCAAAGTGGCTTTGGGCTCATTGTCTTGCACTATACATCATAACATTATCGGCTTGTGCTCTTCTTTACTTTGAATATAAGAGTATTACTAATTTGAGGCTACTACATATTATTGGATCACCTCCAAATCCAAGCCATTTTACAATTCTTGTCCGATCAATTCCCTGGTCTTCAGAAGAATCTTACTGTGAAACTGTGAAAAAATTCTTCTCATATTACCATGCATCAACATATTTGTCGCACCAAATGGTTTATAAGTCCGGTAAAGTTCAAAAACTGAAGGATGATGCTGAACATATGTGTAAGGTAATTAGAGATGCTTCAATGGAAAGGACTTGTAAGCCTAGTTTTATGCAATGTTGCTGTTCTGGAGCACCAACAATTTCTTTTAAGAAGATTTCTACTGAAATGGGTAGTACGCATGGGAGAACTTGCAACACTGACTTGCATTTAGATACAGGAAAAAAGGAATGTTCCTCTGCTTTTGTGTTCTTTAAAAGTCGGTATGCTGCTCTTACGGCTGCACAGGTACTGCAGACATCAAATCCTATGTTATGGGTGACAGATGTAGCTCCTGAACCACATGATGTTTATTGGTCCAATATTTGCATACCATATAGGCAACTTTGGATCCGAAGGATAGCTACACTTGCGGCCTCGGTTGCCTTCATGCTTGTGTTCCTTATCCCTGTTACATTTGTACAAGGCTTGACTCAACTAGAAAAACTTCAGAAAATGTTCCCTTTTCTGACAGGGATACTTAAAGAGAAATTTGTGAATCAGGTGGTGACTGGTTACCTGCCAAGTGTGATATTGGTTTTATTTTTGTGCGCAGTTCCACCCGTGATGATATTATTTTCTGCTGTGGAGGGTTCTATTTCCCGCAGTGCAAGGAAGAAGAGTGCATGTTTTAAAGTCTTGTACTTCACAATCTGGAACGTGTTTTTTGTTAATGTATTTACTGGTTCTGTTATCAGTCAGCTCTCAGTCTTTTCTAGCGTAACAGATCTGCCTGCCCAACTTGCCAAGGCAGTGCCAGCACAGGCTACTTTCTTCACAACTTACATTTTATCATCTGGCTGGGCAAGTTTGGCAGTTGAAGTTATGCAAATTTTCCCTCTACTACGCAATCTTTTCCAGAGATTCATACTCAGGCTTAAAGAAGATGCACTGGATGGCAGCCTATCTTTTCCGTACCATACAGAAGTTCCAAGAATCTTACTGTTTGGATTCCTCGGGTTCACTTGTGCTATTCTGGCACCCCTAATGTTGCCCTTCTTGTTGGTCTACTTTTTCATTGCTTACCTTGTTTATCGAAACCAGATTATCAACGTATACATTACAAAATACGATAGTGGGGGACAGTTCTGGCCCATTGTTCACAACACAACGGTTTTTTCGTTGCTATTTTCTCAACTTATCGCACTAGGGGTGTTTGGACTCAAACGCTCATCAGTTGCATCTGGATTCACCATTCCTCTGCTGATTGGTACGCTTCTATTTCACCAGTATTGTAGGCAACGGTTTCTCCCAGTATTTAGGAGCAATTCAGCACAGATTCTTATTGACTTGGATCGGAGAGATGGGCACAGTGGAAGGATGGAAGAAATTTATGAACATTTGCGTTCAGCCTACAACCAGTCCAGTTTAATGCCACATACCACAAGCCAACCCGAATGTGTCAGTCTTCACGAGGACAAGGATAGTGGTCCATCTTCATCAGAAGATATGGAGACAGGCAATGAAAATGAAATTAGTCAAAAAGATAGACCACGGCCCATTCAACGCACATTGAGTATGAGTTCAGATAAATCCGTACTTGGTGTAAAGCAATGA 2253 0.4052 MDIAALLTSAGINIAVCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRIDLCLERFVPSPSWILKAWETSEDEILAIGGLDAVVFVRILVFSIRVFSIAAVICTILVLPVNYHGMDRMYKNIPLESLEVFTIENVKEGSKWLWAHCLALYIITLSACALLYFEYKSITNLRLLHIIGSPPNPSHFTILVRSIPWSSEESYCETVKKFFSYYHASTYLSHQMVYKSGKVQKLKDDAEHMCKVIRDASMERTCKPSFMQCCCSGAPTISFKKISTEMGSTHGRTCNTDLHLDTGKKECSSAFVFFKSRYAALTAAQVLQTSNPMLWVTDVAPEPHDVYWSNICIPYRQLWIRRIATLAASVAFMLVFLIPVTFVQGLTQLEKLQKMFPFLTGILKEKFVNQVVTGYLPSVILVLFLCAVPPVMILFSAVEGSISRSARKKSACFKVLYFTIWNVFFVNVFTGSVISQLSVFSSVTDLPAQLAKAVPAQATFFTTYILSSGWASLAVEVMQIFPLLRNLFQRFILRLKEDALDGSLSFPYHTEVPRILLFGFLGFTCAILAPLMLPFLLVYFFIAYLVYRNQIINVYITKYDSGGQFWPIVHNTTVFSLLFSQLIALGVFGLKRSSVASGFTIPLLIGTLLFHQYCRQRFLPVFRSNSAQILIDLDRRDGHSGRMEEIYEHLRSAYNQSSLMPHTTSQPECVSLHEDKDSGPSSSEDMETGNENEISQKDRPRPIQRTLSMSSDKSVLGVKQ* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1973 750 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Gso17g1973 750 Pfam Calcium-dependent channel, 7TM region, putative phosphate 351 618 IPR003864 GO:0016020
Gso17g1973 750 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 340 IPR027815 -
Gso17g1973 750 MobiDBLite consensus disorder prediction 687 750 - -
Gso17g1973 750 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 738 - -
Gso17g1973 750 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 738 IPR045122 GO:0005227
Gso17g1973 750 MobiDBLite consensus disorder prediction 731 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1973 Gso-Chr17 38979969 38988834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1973 K21989 - gmx:100796574 1498.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0804 14 8643411 8658307 Gso17g1973 17 38979969 38988834 GST
Gso17g1973 17 38979969 38988834 Gso4g0422 4 3944565 3955402 PCT
Gso4g0422 4 3944565 3955402 Gso17g1973 17 38979969 38988834 PCT