Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1964 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTGCTCAAGGTTCCGGAAATCGAACAGAAGGTGCTGGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTACTGTGCTGGCAGAGATTTCACAGGCTACCAAAAAATTTACTGAATGCCAAATGATCATGAATGTCCTTTGGACAAGACTGGGTGAAACTGGAAAAGATTGGCGTTATGTATACAAGGCATTAGCTGTTATAGAATATTTGGTAGCACATGGATCTGAACGTGCGGTTGATGACATTATAGAACATACTTTTCAGATATCTGCACTTTCTAGTTTTGAATATGTCGAACCTAGTGGTAAGGATGTGGGACTCAATGTAAGGAAGAAGGCTGAAAACATTGTGTCGCTTTTGAATGATAAAGATAAGATACATGAAGTCAGAAATAAAGCTGCTGCAAACCGTGACAAGTACATTGGAGTTTCTTCTAGTGGGATCACATACAAGTCTGGGTCAGCCTCCTCTTATGGTAGTGGCAGCAGCTTTCAGAGCAGTGGTAAATATGGAGGCTTTGGATCTAGAGATGGCGACAGGTTTAATGATAGCTATAGAGACAAAGGATCCTATGAAGAAGAAAAAGATTACCAAGGAAAATCACACCATGCCACCGCAGGTGACAATCAAGAGAATTCCTTCAAGAAGGGTTCTGCTCGCTCTGCCAGCAAAAGTCAGGAGAACAAGTCATCTAGAGTATCAAAGTCATCTACTAATGCAAATAATTATGGTTCAGTTCCTTCTCAAAGTTCAAGTGTACCTGCAAACAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAAAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAATCGGTGACCTCATGGATGCTCCAACATCTGTTCCTGTAGAAAAGGCAGCAACTAGTAATGTGCCAGAGGTTGATCTTTTTGCAGATGCATCATTTGTATCAGCAGAACCTCATGTGGATAAAGGAGCCATTTCTCAACCACAGGCTGAGGTTGATCTATTTTCTTCACAACCAGCCATTCCTGCAGTTACACCTACAGTTGACTTGTTTTCCATTCCTGAACTGGCAGTGCAGCCAAACAACAAGTCGGAGAAGTCTGTTCCTATGAATAACAGCACTATCGATCCCTTTGCTGCTGTTCCTCTTAATAATTTTGATGGATCTGATATTTTTGGTGATTTTACTTCTCAATCTGATTCTGTGTCTTCACAGCCCTCCAATAATGTTGTCAGTGATGGCAAGCATGATAATGTGACTGGTAAATCTTTAGCAGACTCTAAAGTTTCCCCTAAAAAGGATGCTTTTCAGGTGAAGTCTGGCGTCTGGGCTGATTCACTAAGCCGTGGACTGATTGATCTCAATATAACTGCTCCTAAAAAAGTATCCCTTGTGGATGTTGGAATTGTGGGTGGATTGAGTGATGGATCCGATGAAAGGGAGAAAGGCCCTCCACCTTCATTTTACATGGGGAGAGCTATGGGTTCAGGATCTGGTCTTGGAATGGGTAGGTCTGGATTCACTCCTTCACAGCCAATAGCTGGAGACGACTTTTTCTCAAACCTTGGAAACCAACAATATCAATTTGGTGGGTTCCAAAAGTAA 1695 0.4206 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTVLAEISQATKKFTECQMIMNVLWTRLGETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVSLLNDKDKIHEVRNKAAANRDKYIGVSSSGITYKSGSASSYGSGSSFQSSGKYGGFGSRDGDRFNDSYRDKGSYEEEKDYQGKSHHATAGDNQENSFKKGSARSASKSQENKSSRVSKSSTNANNYGSVPSQSSSVPANSTEDDMDDFDPRGTSTKTSAGNSNQVDLFGQDLIGDLMDAPTSVPVEKAATSNVPEVDLFADASFVSAEPHVDKGAISQPQAEVDLFSSQPAIPAVTPTVDLFSIPELAVQPNNKSEKSVPMNNSTIDPFAAVPLNNFDGSDIFGDFTSQSDSVSSQPSNNVVSDGKHDNVTGKSLADSKVSPKKDAFQVKSGVWADSLSRGLIDLNITAPKKVSLVDVGIVGGLSDGSDEREKGPPPSFYMGRAMGSGSGLGMGRSGFTPSQPIAGDDFFSNLGNQQYQFGGFQK* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1964 564 MobiDBLite consensus disorder prediction 503 544 - -
Gso17g1964 564 MobiDBLite consensus disorder prediction 427 446 - -
Gso17g1964 564 MobiDBLite consensus disorder prediction 201 224 - -
Gso17g1964 564 Gene3D - 24 164 IPR008942 -
Gso17g1964 564 MobiDBLite consensus disorder prediction 225 280 - -
Gso17g1964 564 MobiDBLite consensus disorder prediction 174 192 - -
Gso17g1964 564 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Gso17g1964 564 Pfam ENTH domain 27 147 IPR013809 -
Gso17g1964 564 SMART enth_2 26 152 IPR013809 -
Gso17g1964 564 MobiDBLite consensus disorder prediction 427 457 - -
Gso17g1964 564 CDD ENTH 28 144 - -
Gso17g1964 564 PANTHER EPSIN/ENT-RELATED 1 555 - -
Gso17g1964 564 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 555 IPR033521 GO:0006623|GO:0030276
Gso17g1964 564 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Gso17g1964 564 MobiDBLite consensus disorder prediction 174 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1964 Gso-Chr17 38822821 38831214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1964 K12471 - gmx:100789110 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0812 14 8863782 8870494 Gso17g1964 17 38822821 38831214 GST