Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1961 ATGGGATCCACAATCTTCATTCTCTTGGGGCTGGTAGTTACAGTTTACGGTTTTGTGGACTATGGTAGTAGCTCTTTGTCAAGACTCAAGGTTTTGGAAGTTGAGAGAAAATTAAAGCAGCTTAGAGGACATTCCTTAAAAACTATCCAGAGTGAAGATGGGGATATCATTGATTGCATTGACATTAATAAGCAACCAGCTTTTGATCATCCTGCATTGAAAGGTCACAAAATCCAGATGGCTCCCACTTATAATTCAGCTAAGAAGGACATGACAATAGGGACCAAAACTACTAGAACTAGAAAAAATGCAAAGAGTGGCAAAATGATGAAGCAAAGGGATGAAGGGTCATCTGTGACTGTTACTTCCCAAGTGTGGCAGAAAAGTGGAAGATGTCCAGAGGGAACAATACCTGTTCGAAGAATACAAGAAAGAGACATGATAAAGGCTCATTCAATTGAAGATTATGGAAGGAAGAAGCCAAGCTTCTCTCATCAACATGTTGGTCAACTGAATAATAATCTCGACTCCTTTGTACAACTGAAAAACCACTCTAAAGCAATAGCATTGGCAGTTGGGTTCCGTTACTTGGGAGCCAAAGGAGACATCAAAGTGGACAACCCTTCTGTTGAAAAGGATGATGAATACAGCACTTCCCAAGTATCTCTCTTAACAGGGCCATACAATGACTTTGAGTGTGTTGAAGCTGGTTGGGCGGTCAATCCCAGTGTGTATGGAGATAGGCAAACTCGGTTATTTGTTTACTGGACGGCTGATGCTTCAAAGAAAACGGGTTGCTTTGATCTGACTTGTCCTGGATTTGTTCAGATTAGCAATGAAATTGCTTTAGGTGCTGCAATTTATCCGATATCAATTCCTGGTGGGCTTCAATACATAATAACTATTTACATCTATAAGGATCCCTATACCAATAATTGGTGGGTGCAATATGGTGAGAATACCAACATAGGTTATTGGCCACCTGAGTTATTTGAAACAATACGTTACAATGCAGAATCTGTGGAGTGGGGTGGTGAAGTTTACAGTTCCACTATTGGGCATACTCCTCACACTGCAACACAAATGGGTAATGGACAATTTGCTTCAGTTTTTGGTGAGTCGTCTACAATAACAAGAATGAGAATTCATGACAACTCTGCAGCCTTGAAGATCCCAGAATATGTTGCTGAATTCACGGATGAATTTAACTGCTATGATGTTTGGTATTTGTCAGATTATGTTGAAGATCCTGAGTTATATTACGGAGGGCCTGGTCAAAATCCAAAATGCCCTTAA 1296 0.4028 MGSTIFILLGLVVTVYGFVDYGSSSLSRLKVLEVERKLKQLRGHSLKTIQSEDGDIIDCIDINKQPAFDHPALKGHKIQMAPTYNSAKKDMTIGTKTTRTRKNAKSGKMMKQRDEGSSVTVTSQVWQKSGRCPEGTIPVRRIQERDMIKAHSIEDYGRKKPSFSHQHVGQLNNNLDSFVQLKNHSKAIALAVGFRYLGAKGDIKVDNPSVEKDDEYSTSQVSLLTGPYNDFECVEAGWAVNPSVYGDRQTRLFVYWTADASKKTGCFDLTCPGFVQISNEIALGAAIYPISIPGGLQYIITIYIYKDPYTNNWWVQYGENTNIGYWPPELFETIRYNAESVEWGGEVYSSTIGHTPHTATQMGNGQFASVFGESSTITRMRIHDNSAALKIPEYVAEFTDEFNCYDVWYLSDYVEDPELYYGGPGQNPKCP* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1961 431 Pfam Neprosin 214 424 IPR004314 -
Gso17g1961 431 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 45 429 - -
Gso17g1961 431 Pfam Neprosin activation peptide 48 168 IPR025521 -
Gso17g1961 431 MobiDBLite consensus disorder prediction 98 133 - -
Gso17g1961 431 PANTHER CARBOXYL-TERMINAL PEPTIDASE 45 429 - -
Gso17g1961 431 Gene3D - 200 322 - -
Gso17g1961 431 MobiDBLite consensus disorder prediction 113 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1961 Gso-Chr17 38800612 38804459 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1961 - - gmx:100816380 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1961 17 38800612 38804459 Gso6g0408 6 3817799 3821074 PCT
Gso6g0408 6 3817799 3821074 Gso17g1961 17 38800612 38804459 PCT